Viewing custom gene annotations in the juicebox

[Vivek]

Hi all,

I am trying to view the inter.hic files created for dm3 genome. Could you let me know how I could view the gene annotations in the juicebox for the dm3 genome?

I have a bed file of the gene coordinates.

Thanks for the help!

Thanks

Vivek

[Muhammad Saad Shamim]

Hi Vivek,

You should be able to load the gene coordinates/bed file via

Annotations > Load Basic Annotations... > Add 1D...

Best,

- Muhammad Saad Shamim

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[Yunjiang Qiu]

Can we load annotation from url instead of local files? I don't see an option to load from urls, but some bigwig files are pretty big.

Thanks,

Yunjiang