On Mon, Jun 18, 2012 at 5:06 PM, Melanie Courtot <
mcou...@gmail.com> wrote:
> Hi Alan,
>
> Thanks for producing the file. I started reviewing it, and made a list of some issues I found on the way. Note that I didn't have time to look at everything yet, so this list is not exhaustive. I tried to group by type of comment; hope that helps.
>
> Cheers,
> Melanie
>
>
> (1) Things unclear
>
> - elucidation for object_aggregate "a is an object aggregate means: a is a material entity consisting exactly of a plurality of objects as member_parts. [025-002" Based on this, one could classify "human" as object aggregate" (cell are cited as example of usage for object), or "car" (engineered artifacts are another example of usage for objects) which I don't think we want?
>
> - I am confused by the examples for relational quality: a marriage bond, an instance of love, an obligation between one person and another. Does that imply that marriage, love and obligation are qualities? I would prefer things like "axial to" (from PATO)
>
> - what is the difference between zero-dimensional spatial region (elucidation "a point in space") and a zero-dimensional continual fiat boundary (a fiat point whose location is defined in relation to some material entity.)? It seems like the latter should be subclass of the former based on elucidations and examples of usage. For example, I would say that "the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet" is a point in space.
these are straight from the BFO2 Reference, so BFO2 Reference issues
should be file for these.
I can try to comment not authoritatively.
1. on object aggregate I don't understand this well enough to comment.
Have you read the pertinent section of the BFO2 Reference document?
(same question for the rest).
2. I concur that the examples for relational quality are not obvious.
I suspect it has to do with Barry's recent work on "Mental qualities".
I think this one is definitely worth filing an issue on. To me these
seem like relational roles.
3. "the quadripoint where the boundaries of Colorado, Utah, New
Mexico, and Arizona meet" : There are many frames in which that point
is zooming through many points in space. Whereas, no matter what the
frame, the quadripoint is always in the same relation to the
boundaries of Colorado, Utah, New Mexico, and Arizona.
> (2) translation artifacts
>
> - immaterial and material -> immaterial entities and material entities
Yes. I have not yet brought in the official names from the BFO2
Reference. (mentioned)
> - some extra characters, e.g. in the example of usage for "three-dimensional spatial region, there is a "\" before the comma. (presumably some character protection?) (apologies if those are the encoding issues you were referring to)
Unfinished. Each example will be in its own property and the \,
protect agains split. Soon.
> - last bracket of axiom number is stripped off
Fixed in the current version
> - when defining for example "generically dependent continuant". The current definition reads "a is a generically dependent continuant = Def. a is a continuant that generically depends on one or more other entities. [074-001" I think we should lose the part before and up to =Def.
This is what it says in the reference. I could systematically remove
these prefixes if it was desired. Post an OWL issue?
> (3) link translation-bfo2 ref
>
> - elucidation of spatial region:"A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. [035-001" there is a relation "continuant part of at some time" and a relation "continent proper part of at some time", but no "continuant_part_of". It would be helpful to homogenize names.
Agreed. I am thinking about how to do this. Relatively low priority
compared to getting more axioms in.
> - no elucidation for fiat object
Fixed in current version
> - typo in elucidation of object "a is an object means: a is a material entity which manifests causal unity of one or other of the types CUn listed above & is of a type (a material universal) instances of which are maximal relative to this criterion of causal unity. [024-001"
The & are now gone. Was there another typo?
> (4) other comments
>
> - three-dimensional spatial region : add "spatial volume" as alternative term?
> - disposition: add "internally-grounded realizable entity" as alternative term?
To be added as annotation next time I do some work on Reference
document (which is still in limbo due to Barry editing a older version
by mistake. Could you add these to a new issue to collect stuff that
can be got by adding annotations to the reference?
> - role: add "Externally-Grounded Realizable entity" as alternative term? (Note: there is no index entry for role in the reference)
Add a new reference issue, please.
> - what is the bfo specification label annotation property?
It is to keep track of the identifiers I use in the code that generates BFO.
> - is there a minimal set of metadata agreed upon? For example, immaterial entity doesn't have example of usage
I take these from the reference. Possibility 1: There is some example
and I missed annotating it. Remedy: Have a look yourself to see if I
missed it. Possibility 2: There weren't any in the reference in which
case ask Barry to amend (with reference issue). Possibility 3, pull
up the examples from the subclasses.
Preference?
> (5) General remarks
>
> (i) would it be possible to use uppercase letter in elucidation" For example, instead of "To say that a is a realizable entity is to say that a is a specifically dependent continuant that inheres in some material entity and is of a type instances of which are realized in processes of a correlated type. [058-001" I think using "To say that A is a realizable entity is to say that A is a specifically dependent continuant that inheres in some material entity and is of A type instances of which are realized in processes of a correlated type. [058-001" or use an other letter than "a"? It is confusing to read in an english sentence.
File a reference issue, please.
> (ii) could we split example of usages in different annotation properties? e.g. instead of "an atom of element X has the disposition to decay to an atom of element Y\the cell wall is disposed to filter chemicals in endocitosis and exocitosis\certain people have a predisposition to colon cancer\children are innately disposed to categorize objects in certain ways." we would have 3 different annotations "example of usage"
On the list.
Thanks so much for your review! Extremely useful and just the sort of
thing we need!
-Alan