I've set up a minimal proof of concept at http://angular.moatra.net (I would have used plunker, but it was being finnicky). If you right-click on the "Other Link!" link, the location should be updated to http://angular.moatra.net/other.html
The easiest work-around is to update the bootstrap code from using angular.bootstrap(document); to using angular.bootstrap(document.documentElement);
It took me a while to track down, so I thought I'd share with the community. Thanks for the wonderful work!
-Thomas