GlioVis - Data Visualization Tools for Brain Tumor Datasets - Google Groups

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Welcome to the GlioVis user group.

Post your question and we'll try to get back to you as soon as possible!

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Juan Andrés Sánchez

Oct 8

Disconnected from the server.

Is it possible to fix this error? Is there any alternative if not? I apreciate a lot your help. Best,

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Disconnected from the server.

Is it possible to fix this error? Is there any alternative if not? I apreciate a lot your help. Best,

Oct 8

Sep 2

https://kdph.shinyapps.io/atlas/ This is like GlioVis -- but better! Research Article: https://pubmed

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https://kdph.shinyapps.io/atlas/ This is like GlioVis -- but better! Research Article: https://pubmed

Sep 2

7/30/25

Hello, I am trying to see a gene of interest in different cell types using TCGA_GBM data. When i

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Hello, I am trying to see a gene of interest in different cell types using TCGA_GBM data. When i

7/30/25

William Echavidre, He qiu2

6/19/25

No access to the tool

I meet with the same issue now? How to deal it with? thanks  On Wednesday, April 16, 2025 at 1:24:31

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No access to the tool

I meet with the same issue now? How to deal it with? thanks  On Wednesday, April 16, 2025 at 1:24:31

6/19/25

1/8/25

Hello! Thank you very much for your tool! I was wondering if it is possible to explore a cohorte

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Hello! Thank you very much for your tool! I was wondering if it is possible to explore a cohorte

1/8/25

Efrat Shavit-Stein

9/5/24

acsses to the GlioVis tool

Dear all, I did some analysis a few months ago and wanted to go back to the webstie and now I have no

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acsses to the GlioVis tool

Dear all, I did some analysis a few months ago and wanted to go back to the webstie and now I have no

9/5/24

alireza sohrabi

6/13/24

Hi Everyone, I have a question regarding Rembrandt differential expression data. Since Rembrandt data

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Hi Everyone, I have a question regarding Rembrandt differential expression data. Since Rembrandt data

6/13/24

6/11/24

gliovis and gepia

Why do the correlation scatter plots made by Gliovis and GEPIA have large differences?The database

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gliovis and gepia

Why do the correlation scatter plots made by Gliovis and GEPIA have large differences?The database

6/11/24

12/4/22

to download the dataset and deposit into my affiliated university data repository platform

Hi, just wonder if we can download and/or any supported protocol, such as the OAI-PMH to harvest the

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to download the dataset and deposit into my affiliated university data repository platform

Hi, just wonder if we can download and/or any supported protocol, such as the OAI-PMH to harvest the

12/4/22

11/3/22

CGGA expsn 502 Gateway error, TCGA subtype calc, TCGA Ag,HG,Rseq all same pheno txt files

I tried to download the CGGA expression data, but the server timed out. Based on the # of samples, I

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CGGA expsn 502 Gateway error, TCGA subtype calc, TCGA Ag,HG,Rseq all same pheno txt files

I tried to download the CGGA expression data, but the server timed out. Based on the # of samples, I

11/3/22

9/12/22

How to transpose a giant TXT file?

Hi Recently I downloaded CGGA data from GlioVis. I found there have more than 20k genes in the TXT

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How to transpose a giant TXT file?

Hi Recently I downloaded CGGA data from GlioVis. I found there have more than 20k genes in the TXT

9/12/22

4/30/22

Data Download: I can't download the CGGA expression file after times of trying.

The data download portal is super slow, I wonder if someone else may face the same problem as me, is

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Data Download: I can't download the CGGA expression file after times of trying.

The data download portal is super slow, I wonder if someone else may face the same problem as me, is

4/30/22

Sara Franceschi

3/1/22

Dear all, as I open the window "explore" on the Gliovis website I see this error: "

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Dear all, as I open the window "explore" on the Gliovis website I see this error: "

3/1/22

6/1/21

the tools can't plot

the tools can't plot

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the tools can't plot

the tools can't plot

6/1/21

Prospero Civita

1/20/21

DATA PLOT NOT AVAILABLE

Hello folks, Is there anyone having the same issue with plot visualization? it has been already two

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DATA PLOT NOT AVAILABLE

Hello folks, Is there anyone having the same issue with plot visualization? it has been already two

1/20/21

10/7/20

disconnected from the server

Hi!!! I have been trying for several weeks to use GioVis but, when I choose any of the datasets on

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disconnected from the server

Hi!!! I have been trying for several weeks to use GioVis but, when I choose any of the datasets on

10/7/20

sarita kumari, Yi Xiong2

5/23/20

Doubt regarding HR value in survival analysis plot

I think it is due to the assignment of group (low expression or high expression). I think you may

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Doubt regarding HR value in survival analysis plot

I think it is due to the assignment of group (low expression or high expression). I think you may

5/23/20

9/26/19

If you choose High vs Low for the cutoff of a survival curve, how are high and low determined?

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If you choose High vs Low for the cutoff of a survival curve, how are high and low determined?

9/26/19

Yahaya Abubakar

8/19/19

scRNAseq data GlioVis

Hello, The GlioVis tool has been very helpful to me in subtyping microarray data. I tried to upload

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scRNAseq data GlioVis

Hello, The GlioVis tool has been very helpful to me in subtyping microarray data. I tried to upload

8/19/19

claire.van...@gmail.com

8/14/19

Hi, It's been ~ a couple of weeks that I would like to generate some graphs based upon the

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Hi, It's been ~ a couple of weeks that I would like to generate some graphs based upon the

8/14/19

tymil...@gmail.com

3/27/19

RNAseq TCGA analysis

Hi Massimo, Thanks again for putting GlioVis together! I'm interested in getting an expression

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RNAseq TCGA analysis

Hi Massimo, Thanks again for putting GlioVis together! I'm interested in getting an expression

3/27/19

roland....@gmail.com

12/17/18

SubtypeMe for GBM cells

Hi, I was looking for more information about the kind data input for SubtypeMe. We are working with

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SubtypeMe for GBM cells

Hi, I was looking for more information about the kind data input for SubtypeMe. We are working with

12/17/18

5/26/18

Multiple genes survival Kaplan Meier Plot

Hello, What a great resource! I saw in Wang,RIch 2018 they used GlioVis and did multiple gene

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Multiple genes survival Kaplan Meier Plot

Hello, What a great resource! I saw in Wang,RIch 2018 they used GlioVis and did multiple gene

5/26/18

hh3...@bristol.ac.uk

1/10/17

survival analyses gliovis

Hi do you have a reference or resource you could forward to me to explain why different platforms (ie

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survival analyses gliovis

Hi do you have a reference or resource you could forward to me to explain why different platforms (ie

1/10/17

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