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WashU Epigenome Browser
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tengmx
,
lid...@gmail.com
4
Aug 22
Does the legacy browser still work
Hi tengmx, Got some progress, still working on it. The server got some file system errors, trying to
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Does the legacy browser still work
Hi tengmx, Got some progress, still working on it. The server got some file system errors, trying to
Aug 22
lid...@gmail.com
2
Jul 18
server issue!
Hello, The Browser server was back online before. Sorry for late notification. Feel free to let us
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server issue!
Hello, The Browser server was back online before. Sorry for late notification. Feel free to let us
Jul 18
Chiara Nicoletti
,
lid...@gmail.com
2
Jul 1
Remote tracks from Cyverse not loading
Hi Chiara, I assume this was fixed during our personal emails? Sorry I forgot to follow up in time.
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Remote tracks from Cyverse not loading
Hi Chiara, I assume this was fixed during our personal emails? Sorry I forgot to follow up in time.
Jul 1
Luke Deary
,
lid...@gmail.com
2
Jul 1
Screenshot Problem: Local hub ignores group assignment and resizes
Hi Luke, This seems like a bug, sorry for that. Will like a look! On Monday, June 30, 2025 at 2:58:57
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Screenshot Problem: Local hub ignores group assignment and resizes
Hi Luke, This seems like a bug, sorry for that. Will like a look! On Monday, June 30, 2025 at 2:58:57
Jul 1
Rebekah Rashford
,
lid...@gmail.com
8
Jun 3
"DNase Hi-C on tissues" (from mm10 mouse brain) available for mm39?
Yes, this is so helpful! Thank you so much. Apologies for the suggestion of lifting over the hic file
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"DNase Hi-C on tissues" (from mm10 mouse brain) available for mm39?
Yes, this is so helpful! Thank you so much. Apologies for the suggestion of lifting over the hic file
Jun 3
Joanne Thorvaldsen
,
lid...@gmail.com
3
May 29
Unable to load human h19 Public Data Dnase I hypersensitivity tracks
Hi Joanne, We transferred files to another server I think the tracks should be loadable now, let me
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Unable to load human h19 Public Data Dnase I hypersensitivity tracks
Hi Joanne, We transferred files to another server I think the tracks should be loadable now, let me
May 29
per per
,
lid...@gmail.com
11
May 28
How to download the high quality picture?
Hello, Yes, you are right! There is a bug for screenshot function when highlights exist. A fix should
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How to download the high quality picture?
Hello, Yes, you are right! There is a bug for screenshot function when highlights exist. A fix should
May 28
haichao wei
May 16
Can't find the browser
Hi Sir, I found I can't find my data on the browser. Could you help me? Thanks, Best, HW
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Can't find the browser
Hi Sir, I found I can't find my data on the browser. Could you help me? Thanks, Best, HW
May 16
per per
,
lid...@gmail.com
2
May 12
"Data fetch failed Reload page or change view to retry"
Hi, The server we had for hosting those data have a massive hard drive failure last week. We are
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"Data fetch failed Reload page or change view to retry"
Hi, The server we had for hosting those data have a massive hard drive failure last week. We are
May 12
Owen Morgan
,
lid...@gmail.com
2
Mar 19
Unable to install current version from GitHub
Hello, Sorry, I missed this post. you may want to try switching react-scripts to version 3.4.1.
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Unable to install current version from GitHub
Hello, Sorry, I missed this post. you may want to try switching react-scripts to version 3.4.1.
Mar 19
Amberly Cole
,
lid...@gmail.com
2
Mar 19
Inconsistent Signal Display for Same Gene Across Sessions
Hi Amberly, I'm sorry I missed this post. If you want to send me the session links, I would love
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Inconsistent Signal Display for Same Gene Across Sessions
Hi Amberly, I'm sorry I missed this post. If you want to send me the session links, I would love
Mar 19
lid...@gmail.com
Mar 19
New Browser version notification
Dear Browser users, We are launching a significant update to the Browser at https://epigenomegateway.
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New Browser version notification
Dear Browser users, We are launching a significant update to the Browser at https://epigenomegateway.
Mar 19
Kailee Yoshimura
,
lid...@gmail.com
2
8/28/24
Data fetch failed when using AWS S3
Hi Kailee, The reason is the default S3 url is with http, not https then you would need to use our
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Data fetch failed when using AWS S3
Hi Kailee, The reason is the default S3 url is with http, not https then you would need to use our
8/28/24
Joaquin Reyna
,
lid...@gmail.com
2
8/7/24
Added a line break within a label?
Hi Joaquin, Yes br or \n won't work...we usually add the label later at Illustrator or photoshop
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Added a line break within a label?
Hi Joaquin, Yes br or \n won't work...we usually add the label later at Illustrator or photoshop
8/7/24
LK Lyu
,
lid...@gmail.com
2
3/27/24
Show no data on my RNA-seq track
I might accidentally replied to you only, sorry can you try right click your track, choose `
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Show no data on my RNA-seq track
I might accidentally replied to you only, sorry can you try right click your track, choose `
3/27/24
Lin Gao
,
lid...@gmail.com
3
3/25/24
Cannot load sessions in washu epigenome browser
Hi, I can load my sessions now! Thank you very much! Best, Lin On Monday 25 March 2024 at 19:31:47
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Cannot load sessions in washu epigenome browser
Hi, I can load my sessions now! Thank you very much! Best, Lin On Monday 25 March 2024 at 19:31:47
3/25/24
Bhavana Ragipani
,
lid...@gmail.com
2
1/22/24
Is it possible to upload a custom genome?
Hi Bhavana, Sorry currently this function is not there yet, need to add a new custom genome following
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Is it possible to upload a custom genome?
Hi Bhavana, Sorry currently this function is not there yet, need to add a new custom genome following
1/22/24
yuting liu
,
lid...@gmail.com
2
1/18/24
Assign genome for data hub
Hi Yuting, Sorry I missed your question during holiday break. The datahub cannot define genome in it,
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Assign genome for data hub
Hi Yuting, Sorry I missed your question during holiday break. The datahub cannot define genome in it,
1/18/24
Vrinda Venu
,
lid...@gmail.com
2
1/18/24
installation issues
Hi Vrinda, Thanks for trying the browser. I guess your node version maybe is too high. Could you
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installation issues
Hi Vrinda, Thanks for trying the browser. I guess your node version maybe is too high. Could you
1/18/24
Xiang Liu
,
lid...@gmail.com
2
10/5/23
Fetch data from CyVerse
Hi Xiang, sorry for late reply, I will reply you on github issue https://github.com/lidaof/eg-react/
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Fetch data from CyVerse
Hi Xiang, sorry for late reply, I will reply you on github issue https://github.com/lidaof/eg-react/
10/5/23
Matthieu Lavigne
,
lid...@gmail.com
2
3/7/23
load a custom genome for Parhyale hawaiensis
Hi Matthieu. We don't have a feature for supporting custom genomes in the browser currently, most
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load a custom genome for Parhyale hawaiensis
Hi Matthieu. We don't have a feature for supporting custom genomes in the browser currently, most
3/7/23
Joaquin Reyna
,
lid...@gmail.com
5
2/14/23
Resizing track heights for bigbed
Hi Joaquin, There is no minRows options, if you look at https://target.wustl.edu/dli/embed/
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Resizing track heights for bigbed
Hi Joaquin, There is no minRows options, if you look at https://target.wustl.edu/dli/embed/
2/14/23
Joaquin Reyna
,
lid...@gmail.com
3
2/14/23
Div For WashU Embedding Has Some Resizing Problems
I tried updating this to maxRows:10 but this doesn't change anything. Do you think it could be
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Div For WashU Embedding Has Some Resizing Problems
I tried updating this to maxRows:10 but this doesn't change anything. Do you think it could be
2/14/23
xianqiang wang
,
lid...@gmail.com
2
2/14/23
local hic track could not show any signal
Hi Xianqiang, Are the chrom names in your hic file 1,2,3...or chr1, chr2. chr3? that may be the issue
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local hic track could not show any signal
Hi Xianqiang, Are the chrom names in your hic file 1,2,3...or chr1, chr2. chr3? that may be the issue
2/14/23
Abhay Kanodia
,
lid...@gmail.com
2
2/7/23
No "highlight entered region" in settings of the browser
Sorry, Abhay! This post somehow didn't go to my inbox and I missed it... The highlight menu has
unread,
No "highlight entered region" in settings of the browser
Sorry, Abhay! This post somehow didn't go to my inbox and I missed it... The highlight menu has
2/7/23
Joaquin Reyna
,
lid...@gmail.com
2
2/7/23
Does the embedding work for T2T v2.0?
Hi Joaquin, Great question! I used the template which doesn't work with T2T either, I will
unread,
Does the embedding work for T2T v2.0?
Hi Joaquin, Great question! I used the template which doesn't work with T2T either, I will
2/7/23
Lei Shang
, …
lid...@gmail.com
4
10/13/22
Error in embedding into html
Hi Joaquin, Yes, IT somehow misconfigured the DNS and still not fixed it you can use this URL instead
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Error in embedding into html
Hi Joaquin, Yes, IT somehow misconfigured the DNS and still not fixed it you can use this URL instead
10/13/22
Joaquin Reyna
,
lid...@gmail.com
2
10/10/22
Bug with Highlights in Session File
Hi Joaquin, I have replied to your same github issue, we can have the following conversation there.
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Bug with Highlights in Session File
Hi Joaquin, I have replied to your same github issue, we can have the following conversation there.
10/10/22
洪毓阳
,
lid...@gmail.com
2
7/21/22
Data fetch failed
Hello, for bigwig track type you would need provide a web URL to the bigwig file, if you want to
unread,
Data fetch failed
Hello, for bigwig track type you would need provide a web URL to the bigwig file, if you want to
7/21/22
Omar Abduljaleel
,
lid...@gmail.com
6
7/6/22
3D Coordination of the genes
Hi Omar, The values are just for hg19. There are also models for mouse mm10 from published studies.
unread,
3D Coordination of the genes
Hi Omar, The values are just for hg19. There are also models for mouse mm10 from published studies.
7/6/22