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Thank you for visiting. This forum is created to provide support for the Database for Annotation, Visualization and Integrated Discovery (DAVID). You may ask any question related to DAVID and your question will be answered by other users and /or a DAVID team member in the Laboratory of Human Retrovirology and Immunoinformatics, Leidos Biomedical Research, Inc.,.Frederick National Laboratory for Cancer Research. If you would like a new function to be implemented in the system, you may post your message here. We will evaluate your request carefully and implement it in DAVID if it adds value for the community. Thank you in advance for your contribution!

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Arta Seyedian, … Jyoti Kataria7

7/10/21

Signing up to use RDAVIDWebService but not getting confirmation email

david <- RDAVIDWebService(email="jyoti....@medgenome.com", url="https://david.

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Signing up to use RDAVIDWebService but not getting confirmation email

david <- RDAVIDWebService(email="jyoti....@medgenome.com", url="https://david.

7/10/21

DAVID SYSTEM MANAGER

7/24/20

Hi all: Thank you all for using this forum to support the DAVID. To better serve DAVID users, we move

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Hi all: Thank you all for using this forum to support the DAVID. To better serve DAVID users, we move

7/24/20

zhaiq...@gmail.com, … Brad Sherman7

7/24/20

Why can't upload my gene list and it always stucks in 0% or 20% even after a long time?

DAVID is back up and seems to be functioning well based on limited testing. Please try your lists

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Why can't upload my gene list and it always stucks in 0% or 20% even after a long time?

DAVID is back up and seems to be functioning well based on limited testing. Please try your lists

7/24/20

glenn.d...@gmail.com

7/22/20

Bonferroni and Benjamin p-values

Hi, We have been using DAVID 6.8 for Functional Annotation of gene lists. When we look at the GO_term

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Bonferroni and Benjamin p-values

Hi, We have been using DAVID 6.8 for Functional Annotation of gene lists. When we look at the GO_term

7/22/20

rach...@gmail.com

7/15/20

Enrichment Score

I am analyzing my RNA seq data, and for my publication I need to have enrichment scores for each

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Enrichment Score

I am analyzing my RNA seq data, and for my publication I need to have enrichment scores for each

7/15/20

guy.b...@gmail.com

7/15/20

Reactome links from DAVID's result does not work. I get the following mesage "Sorry we could

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Reactome links from DAVID's result does not work. I get the following mesage "Sorry we could

7/15/20

7/13/20

Gene conversion - the requested resource is not available ?

Hi I am trying to upload a list of Uniprot Gene names (mouse) to DAVID. It doesn't recognise them

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Gene conversion - the requested resource is not available ?

Hi I am trying to upload a list of Uniprot Gene names (mouse) to DAVID. It doesn't recognise them

7/13/20

Jorge Boucas, Brad Sherman4

7/10/20

DAVID WS: retrieving list of mapped genes

Thanks Jorge. I know that we have a function on the web interface to get the unmapped ids, so

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DAVID WS: retrieving list of mapped genes

Thanks Jorge. I know that we have a function on the web interface to get the unmapped ids, so

7/10/20

fry...@gmail.com, Brad Sherman2

7/9/20

wrongly annotated genes in the new version

Hello Assa, Thank you for contacting us and bringing this to our attention. DAVID pulls GO

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wrongly annotated genes in the new version

Hello Assa, Thank you for contacting us and bringing this to our attention. DAVID pulls GO

7/9/20

Ahusn, Brad Sherman2

7/8/20

Chromosome reference

Hi Aaisha, The data is based on GRCh37. Regards, Brad

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Chromosome reference

Hi Aaisha, The data is based on GRCh37. Regards, Brad

7/8/20

eleono...@gmail.com, Brad Sherman3

7/8/20

enrichment analyses not reproducible

Hello Eleonora, Thank you for sending your list. DAVID seems to load all symbols correctly currently.

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enrichment analyses not reproducible

Hello Eleonora, Thank you for sending your list. DAVID seems to load all symbols correctly currently.

7/8/20

jess.ch...@gmail.com, Brad Sherman4

6/30/20

Uploading Background List crashes DAVID

Thanks Jess. Lists of that size can take a few minutes to upload but should go through in a

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Uploading Background List crashes DAVID

Thanks Jess. Lists of that size can take a few minutes to upload but should go through in a

6/30/20

Jorge Boucas, Brad Sherman2

6/10/20

Ensembl gene id / Ensembl release

Hi Jorge, The last update of Ensembl in DAVID was 92. Regards, Brad

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Ensembl gene id / Ensembl release

Hi Jorge, The last update of Ensembl in DAVID was 92. Regards, Brad

6/10/20

Matthew Birk, Brad Sherman2

6/10/20

Can DAVID handle duplicated genes in gene list and background?

Thank you for your question. DAVID will always remove duplicates on list upload for the sake of the

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Can DAVID handle duplicated genes in gene list and background?

Thank you for your question. DAVID will always remove duplicates on list upload for the sake of the

6/10/20

6/4/20

UNIGENE_EST_QUARTILE normal_disease term

Hello, I would like to use UNIGENE_EST_QUARTILE database for my analysis, as a top term I am getting:

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UNIGENE_EST_QUARTILE normal_disease term

Hello, I would like to use UNIGENE_EST_QUARTILE database for my analysis, as a top term I am getting:

6/4/20

6/4/20

Gene Functional Classification/ Visualization of results

Hi! I did functional gene classification and received 10 clusters of genes; I would like to visualize

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Gene Functional Classification/ Visualization of results

Hi! I did functional gene classification and received 10 clusters of genes; I would like to visualize

6/4/20

6/2/20

Database explanation

Hi Everyone, I'm doing research on DAVID and I'm wondering which database are used by DAVID.

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Database explanation

Hi Everyone, I'm doing research on DAVID and I'm wondering which database are used by DAVID.

6/2/20

5/24/20

Functional annotation display options

Hello, I am having trouble understanding the different functional annotation report display options.

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Functional annotation display options

Hello, I am having trouble understanding the different functional annotation report display options.

5/24/20

gfp...@exeter.ac.uk

5/20/20

Difficulty uploading background list

Hello, I am having some trouble with the background list function and was wondering if you would be

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Difficulty uploading background list

Hello, I am having some trouble with the background list function and was wondering if you would be

5/20/20

evakn...@gmail.com, … wesley.m...@gmail.com6

4/30/20

Erroneous error message? "List contains more than 3000 genes" even though I only gave 365

Eva, I wonder if your browser is causing problems for you as well. When I first started using DAVID,

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Erroneous error message? "List contains more than 3000 genes" even though I only gave 365

Eva, I wonder if your browser is causing problems for you as well. When I first started using DAVID,

4/30/20

4/29/20

Hello, I have a list of gene IDs from vectorbase, in the form BGLBxxxx (example: BGLB008405). I try

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Hello, I have a list of gene IDs from vectorbase, in the form BGLBxxxx (example: BGLB008405). I try

4/29/20

florenci...@gmail.com, Brad Sherman3

4/24/20

0 chart records for every hit

Hey Brad, Thank you for your help! This indeed did the trick! Kind regards and stay safe, Florencia

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0 chart records for every hit

Hey Brad, Thank you for your help! This indeed did the trick! Kind regards and stay safe, Florencia

4/24/20

zhengzheng zou, Brad Sherman2

4/22/20

Submission with UNIPROT_ACCESSION

Thank you for including your ids and the screenshots. They are very useful for us to understand why

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Submission with UNIPROT_ACCESSION

Thank you for including your ids and the screenshots. They are very useful for us to understand why

4/22/20

Arta Seyedian, Brad Sherman2

4/20/20

Submitting a query in RDAVIDWebService using Gene Symbols?

Hi Arta, At this time, we do not allow the submission of gene symbols through the web service.

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Submitting a query in RDAVIDWebService using Gene Symbols?

Hi Arta, At this time, we do not allow the submission of gene symbols through the web service.

4/20/20

wesley.m...@gmail.com, Brad Sherman3

4/17/20

DAVID knowledgebase

Thanks for the update Brad, I know it must be a very daunting task to update these databases because

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DAVID knowledgebase

Thanks for the update Brad, I know it must be a very daunting task to update these databases because

4/17/20

shakeelb...@gmail.com, Brad Sherman2

4/17/20

Disease Database

Great suggestion. We are working on an update to DAVID currently which includes identifying and

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Disease Database

Great suggestion. We are working on an update to DAVID currently which includes identifying and

4/17/20

ank...@ahduni.edu.in, Brad Sherman2

4/14/20

Gene Functional Classification for >8000 genes

Hello, We do limit lists to 3000 genes given the computational burden of most tools in DAVID,

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Gene Functional Classification for >8000 genes

Hello, We do limit lists to 3000 genes given the computational burden of most tools in DAVID,

4/14/20

jfvasco...@gmail.com, Brad Sherman2

4/14/20

Help needed with larger dataset

Hello Jaira, Due to the computational requirements for most tools in DAVID, we do limit lists to 3000

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Help needed with larger dataset

Hello Jaira, Due to the computational requirements for most tools in DAVID, we do limit lists to 3000

4/14/20

Mao Mao, Brad Sherman4

4/7/20

You're welcome. DAVID should be accessible now. Regards, Brad

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You're welcome. DAVID should be accessible now. Regards, Brad

4/7/20

ravikuma...@gmail.com, Brad Sherman5

4/2/20

buffalo- gene enrichment analysis

Thank you very much

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buffalo- gene enrichment analysis

Thank you very much

4/2/20

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