installtion of browndye2 in conda env

[Pulkit A Sati]

dear all,

i want to install the latest release of browndye2 into an already exit conda env. there are some software already install in that env. please suggest me the procedure for doing the same. thanking you in anticipation.

[Lane Votapka]

Hi,

I do this frequently, but most of the dependencies need to be installed independently from the Conda environment. I would suggest going to this page: https://browndye.ucsd.edu/download.html, and installing one of the precompiled binaries for your OS. This can be tricky if you don't have sudo privileges on your machine, but the dependencies can be installed locally (but probably not with Conda). Good luck!

-Lane

On Tue, Dec 13, 2022 at 1:56 AM 'Pulkit A Sati' via browndye-users-l <browndye...@ucsd.edu> wrote:

dear all,

i want to install the latest release of browndye2 into an already exit conda env. there are some software already install in that env. please suggest me the procedure for doing the same. thanking you in anticipation.

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Lane Votapka Ph.D.

Staff Scientist, Amaro lab

UC San Diego