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Angela Brooks
2
6/23/22
LRGASP Consortium Update: Thurs. Jun 23, 11am ET
Hi everyone, A reminder that we will present draft figures of our Registered Report for the LRGASP
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LRGASP Consortium Update: Thurs. Jun 23, 11am ET
Hi everyone, A reminder that we will present draft figures of our Registered Report for the LRGASP
6/23/22
Angela Brooks
4/2/22
LRGASP Registered Report and associated manuscripts
Dear colleagues, I'm happy to share that the LRGASP Registered Report was just accepted-in-
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LRGASP Registered Report and associated manuscripts
Dear colleagues, I'm happy to share that the LRGASP Registered Report was just accepted-in-
4/2/22
Angela Brooks
3/10/22
LRGASP Prelim Challenge 3 Results
Apologies for the very late reminder, but the Challenge 3 update call will start shortly: https://
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LRGASP Prelim Challenge 3 Results
Apologies for the very late reminder, but the Challenge 3 update call will start shortly: https://
3/10/22
Angela Brooks
3/3/22
LRGASP Zoom meeting reminder: Preliminary results from Challenge 2
Dear colleagues, Tomorrow (Thursday), we will have the presentation of preliminary Challenge 2
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LRGASP Zoom meeting reminder: Preliminary results from Challenge 2
Dear colleagues, Tomorrow (Thursday), we will have the presentation of preliminary Challenge 2
3/3/22
Angela Brooks
2/16/22
LRGASP Zoom meeting reminder: Preliminary results from Challenge 1
Dear colleagues, Tomorrow we will have the presentation of preliminary Challenge 1 results presented
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LRGASP Zoom meeting reminder: Preliminary results from Challenge 1
Dear colleagues, Tomorrow we will have the presentation of preliminary Challenge 1 results presented
2/16/22
Angela Brooks
2
2/10/22
LRGASP Consortium calls to present preliminary results
A brief clarification: If you participated in Challenge 1 and/or 2, you should have received your
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LRGASP Consortium calls to present preliminary results
A brief clarification: If you participated in Challenge 1 and/or 2, you should have received your
2/10/22
Angela Brooks
11/1/21
Remaining samples submission for Challenge 2 due Nov. 24th
Dear colleagues, Thank you to those who submitted to LRGASP! We had 12 different teams submit for a
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Remaining samples submission for Challenge 2 due Nov. 24th
Dear colleagues, Thank you to those who submitted to LRGASP! We had 12 different teams submit for a
11/1/21
Mark Diekhans
10/8/21
last day to submit to LRGASP
Dear Colleagues, Today is, October 8th, is the LRGASP submission deadline and we are already seeing
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last day to submit to LRGASP
Dear Colleagues, Today is, October 8th, is the LRGASP submission deadline and we are already seeing
10/8/21
Mark Diekhans
10/7/21
updates to lrgasp-tools
Hi all, Due to various issues found by lrgasp submitters, several changes have been made to the
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updates to lrgasp-tools
Hi all, Due to various issues found by lrgasp submitters, several changes have been made to the
10/7/21
Angela Brooks
10/6/21
LRGASP Consortium Call: Thursday October 7, 11am ET
Dear colleagues, The LRGASP submission deadline is this Friday, October 8, 11:59PM PT! We will have a
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LRGASP Consortium Call: Thursday October 7, 11am ET
Dear colleagues, The LRGASP submission deadline is this Friday, October 8, 11:59PM PT! We will have a
10/6/21
Angela Brooks
9/30/21
LRGASP Consortium Call: Thursday, Sep 30, 11am ET
Dear colleagues, We have started to receive submissions! Very exciting! As a reminder, we have
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LRGASP Consortium Call: Thursday, Sep 30, 11am ET
Dear colleagues, We have started to receive submissions! Very exciting! As a reminder, we have
9/30/21
Mark Diekhans
9/29/21
updates to LRGASP submission tools
The lrgasp-tools packages has been updated to version 1.6.0 in response to the first few submissions.
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updates to LRGASP submission tools
The lrgasp-tools packages has been updated to version 1.6.0 in response to the first few submissions.
9/29/21
Angela Brooks
9/23/21
LRGASP Submission Deadline Extended: Oct. 8, 11:59PM PT
Dear colleagues, The organizers decided to extend the deadline by 1 week to help give everyone more
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LRGASP Submission Deadline Extended: Oct. 8, 11:59PM PT
Dear colleagues, The organizers decided to extend the deadline by 1 week to help give everyone more
9/23/21
Angela Brooks
9/23/21
LRGASP Consortium Call: Thursday, Sep. 23, 11am ET
Dear colleagues, We will have another LRGASP Consortium call tomorrow, Thursday, Sep. 23, 11am ET.
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LRGASP Consortium Call: Thursday, Sep. 23, 11am ET
Dear colleagues, We will have another LRGASP Consortium call tomorrow, Thursday, Sep. 23, 11am ET.
9/23/21
Mark Diekhans
9/18/21
lrgasp-tools update
Dear LRGASP participants, The lrgasp-tools pip package has been updated to version 1.3.0. This fixes
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lrgasp-tools update
Dear LRGASP participants, The lrgasp-tools pip package has been updated to version 1.3.0. This fixes
9/18/21
Angela Brooks
2
9/15/21
LRGASP Consortium Call: Thursday, Sep. 16, 11am ET
Just a reminder that we will have a call tomorrow at 11am ET that will primarily be Q&A. The call
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LRGASP Consortium Call: Thursday, Sep. 16, 11am ET
Just a reminder that we will have a call tomorrow at 11am ET that will primarily be Q&A. The call
9/15/21
Mark Diekhans
8/17/21
updates to LRGASP metadata and validation tools
Dear LRGASP Participants, We have updated the LRGASP metadata model and submission tools to make the
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updates to LRGASP metadata and validation tools
Dear LRGASP Participants, We have updated the LRGASP metadata model and submission tools to make the
8/17/21
Angela Brooks
2
8/12/21
LRGASP Consortium Call: Thursday, Aug. 12, 11am ET:
Hi everyone, A reminder that we will have another update call to go over the submission process and
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LRGASP Consortium Call: Thursday, Aug. 12, 11am ET:
Hi everyone, A reminder that we will have another update call to go over the submission process and
8/12/21
Angela Brooks
2
7/21/21
July 22, 8AM PT/11AM ET: LRGASP Consortium Update Call
Hi everyone, This is a reminder of our call tomorrow, July 22, 2021 8am PT/11am ET. There have been
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July 22, 8AM PT/11AM ET: LRGASP Consortium Update Call
Hi everyone, This is a reminder of our call tomorrow, July 22, 2021 8am PT/11am ET. There have been
7/21/21
Mark Diekhans
5/11/21
LRGASP challenge now open
The Long-read RGASP challenge data is now available. Please see https://www.gencodegenes.org/pages/
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LRGASP challenge now open
The Long-read RGASP challenge data is now available. Please see https://www.gencodegenes.org/pages/
5/11/21
Angela Brooks
, …
Ali Mortazavi
4
5/6/21
Thursday, May 6, 11am ET: LRGASP Consortium Call
Apologies for the confusion. The call is 11am ET/8am PT. -Angela- On Thu, May 6, 2021 at 6:45 AM
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Thursday, May 6, 11am ET: LRGASP Consortium Call
Apologies for the confusion. The call is 11am ET/8am PT. -Angela- On Thu, May 6, 2021 at 6:45 AM
5/6/21
Angela Brooks
4/15/21
LRGASP data release and launch of challenges
Dear colleagues, I'm happy to announce that we expect the sequencing data associated with LRGASP
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LRGASP data release and launch of challenges
Dear colleagues, I'm happy to announce that we expect the sequencing data associated with LRGASP
4/15/21
Angela Brooks
2/11/21
LRGASP Participant Survey: Please respond by Feb. 17
Dear colleagues, If you missed the presentation last week, the recording can be found here and will
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LRGASP Participant Survey: Please respond by Feb. 17
Dear colleagues, If you missed the presentation last week, the recording can be found here and will
2/11/21
Angela Brooks
2
2/3/21
LRGASP Consortium Update Call: Feb. 4, 8AM PT
Hi everyone, A reminder that we will be giving an update on LRGASP this Thursday, Feb. 4th at 8am PT/
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LRGASP Consortium Update Call: Feb. 4, 8AM PT
Hi everyone, A reminder that we will be giving an update on LRGASP this Thursday, Feb. 4th at 8am PT/
2/3/21
Angela Brooks
9/23/20
Reminder: LRGASP Consortium Overview: Thursday 9/24, 8AM PT
Dear colleagues, As a reminder, we are meeting this Thursday Sep. 24 8am PT/11am ET to give an
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Reminder: LRGASP Consortium Overview: Thursday 9/24, 8AM PT
Dear colleagues, As a reminder, we are meeting this Thursday Sep. 24 8am PT/11am ET to give an
9/23/20
Angela Brooks
9/15/20
LRGASP Consortium Overview: Thursday 9/24, 8AM PT
Dear colleagues, Thank you for your interest in the Long-read RNA-seq Genome Annotation Assessment
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LRGASP Consortium Overview: Thursday 9/24, 8AM PT
Dear colleagues, Thank you for your interest in the Long-read RNA-seq Genome Annotation Assessment
9/15/20