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WRF Hydro configuration request for Intel LLVM

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Will H

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Jan 9, 2024, 11:09:28 PM1/9/24

to wrf-hydro_users

So in 2024 Intel annouced that they will be removing the intel compilers ifort/icc/icpc with new intel llvm compilers ifx/icx/icpx and associated mpi compilers.

As it stands with WRF-Hydro 5.2 there is no configuration set up for these new intel llvm compilers.

I have tried to create one from scratch using the existing intel compilers as a guide and the llvm tutorials.

I request that NCAR look at these and see if they are correct and can implemented them into the main branch of 5.2 or with 5.3 release.

As it stands right now anyone who downloads the new intel compilers cannot get the classic compiler without paying for it.

Thanks,

Will

Failure_WRFHYDRO_STANDALONE.zip

Message has been deleted

Will H

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Feb 4, 2024, 5:38:39 AM2/4/24

to wrf-hydro_users, Will H, ksam...@ucar.edu

Is this being worked on Kevin?

Maybe for the next release of 5.3 or wrf 4.6?

Ryan Cabell

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Feb 5, 2024, 12:49:28 PM2/5/24

to wrf-hydro_users, Will H, Kevin

The legacy WRF-Hydro build system (using ./configure and ./compile_*) is being deprecated in favor of our new CMake-based build system, so no effort will be made to support new compilers with those older scripts. We are looking at the new Intel compilers, the Arm Fortran compiler, and AMD's AOCC Fortran compiler compatibility in the future, but these are low priorities for us and may not be supported until version 5.4 or later.

Will H

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Feb 5, 2024, 12:58:14 PM2/5/24

to Ryan Cabell, wrf-hydro_users, Kevin

Thanks for the update.

Will H

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Feb 6, 2024, 6:36:51 AM2/6/24

to Ryan Cabell, wrf-hydro_users, Kevin

Where can I find instructions for the CMAKE build?

On Mon, Feb 5, 2024 at 11:49 AM Ryan Cabell <rca...@ucar.edu> wrote:

Will H

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Mar 20, 2024, 6:57:35 AM3/20/24

to wrf-hydro_users, Will H, wrf-hydro_users, Ryan Cabell

Will CMAKE support LLVM compilers by intel?

Will there be new instructions on the website and github on how to build with CMAKE?

Will H

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Jan 27, 2025, 5:37:21 PMJan 27

to wrf-hydro_users

Anyone have any idea why this is failing?

---------- Forwarded message ---------
From: Will H <hathew...@gmail.com>
Date: Mon, Jan 27, 2025, 2:02 PM
Subject: Re: WRF Hydro configuration request for Intel LLVM
To: Ryan Cabell <rca...@ucar.edu>

good afternoon ryan,

I'm having some issues compiling wrf hydro 5.3 coupled.

I'm getting a strange error where it is not making a make.comm file.

Would you mind taking a look at the logs to see what's going on? I've also included the script that I'm using to show you the commands I am issuing.

Thanks for any help you can provide,

William

On Wed, Jul 17, 2024 at 5:08 PM Ryan Cabell <rca...@ucar.edu> wrote:

Hi Will,

Instructions for using the CMake build system can be found here:

https://github.com/NCAR/wrf_hydro_nwm_public/blob/main/docs/BUILD.md

This is supported in WRF-Hydro v5.3 and will be the default under the upcoming v5.4 release. Unfortunately, I don’t have a specific timeline for that release yet but we are hoping it will be available before the end of the summer.

Thanks,
Ryan

----------------------------------------------------------------
Ryan Cabell
Research Applications Laboratory
NSF National Center for Atmospheric Research

rca...@ucar.edu - 303.497.2880

On Jul 17, 2024, at 16:04, Will H <hathew...@gmail.com> wrote:

Do you have a tutorial for cmake

compile.wrf2.log

configure.wrf

compile.wrf1.log

Will H

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Jan 28, 2025, 7:31:28 AMJan 28

to wrf-hydro_users, Will H

new information.

I can build wrf-hydro coupled using the old method but not the new cmake method

export NETCDF_INC=$DIR/NETCDF/include
export NETCDF_LIB=$DIR/NETCDF/lib
mkdir
cd "${WRF_FOLDER}"/Downloads
wget -c https://github.com/NCAR/wrf_hydro_nwm_public/archive/refs/tags/v5.3.0.tar.gz -O WRFHYDRO.5.3.tar.gz
tar -xvzf WRFHYDRO.5.3.tar.gz -C "${WRF_FOLDER}"/

#Modifying WRF-HYDRO Environment
#Echo commands use due to lack of knowledge
cd "${WRF_FOLDER}"/wrf_hydro_nwm_public-5.3.0/trunk/NDHMS/template

sed -i 's/SPATIAL_SOIL=0/SPATIAL_SOIL=1/g' setEnvar.sh # Spatially distributed parameters for NoahMP: 0=Off, 1=On.
sed -i 's/WRF_HYDRO_NUDGING=0/WRF_HYDRO_NUDGING=1/g' setEnvar.sh # Streamflow nudging: 0=Off, 1=On.
echo " " >>setEnvar.sh
echo "# Large netcdf file support: 0=Off, 1=On." >>setEnvar.sh
echo "export WRFIO_NCD_LARGE_FILE_SUPPORT=1" >>setEnvar.sh
cp -r setEnvar.sh "${WRF_FOLDER}"/wrf_hydro_nwm_public-5.3.0/trunk/NDHMS

cd "${WRF_FOLDER}"/wrf_hydro_nwm_public-5.3.0/trunk/NDHMS

if [ ${auto_config} -eq 1 ]; then
echo 2 | ./configure 2>&1 | tee configure.log
else
./configure 2>&1 | tee configure.log #option 2 for gfortran
fi

./compile_offline_NoahMP.sh setEnvar.sh 2>&1 | tee compile_offline_NoahMP.log

read -r -t 5 -p "I am going to wait for 5 seconds only ..."
echo " "

Soren Rasmussen

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Jan 28, 2025, 11:52:06 AMJan 28

to wrf-hyd...@ucar.edu, Will H

Hi Will,

The WRF v4.6.1 does the CMake but when I was testing with ifx versions 2023.2.0 and 2024.21 it failed in WRF. It looks like an internal compiler error (ICE) in the external RSL_LITE package.

Those ifx versions both worked to build the main branch of WRF-Hydro and v5.3 on Derecho. I used the following command from trunk/NDHMS for v5.3 or from the top directory of the main branch

$ mkdir build

$ cd build

$ FC=ifx cmake .. -DSPATIAL_SOIL=1 -DWRF_HYDRO=1 -DWRF_HYDRO_NUDGING=1 \
-DWRFIO_NCD_LARGE_FILE_SUPPORT=1 \
-DCMAKE_Fortran_COMPILER=ifx

$ make -j 4

NOTE: make -j 8 might lead to an error in v5.3, there was a slight issue in how the dependencies were setup in CMake that has since been fixed.

Here is that WRF ifx error

```

[ 49%] Building Fortran object CMakeFiles/WRF_Core.dir/external/RSL_LITE/feedback_domain_em_part1.F.o
ifx: error #10106: Fatal error in /glade/u/apps/common/23.08/spack/opt/spack/intel-oneapi-compilers/2024.2.1/compiler/2024.2/bin/compiler/xfortcom, terminated by kill signal
compilation aborted for /glade/derecho/scratch/soren/src/wrf-hydro/coupled_case/project_dir/tmp/WRFV4.6.1/external/RSL_LITE/feedback_domain_em_part1.F (code 1)
make[2]: *** [CMakeFiles/WRF_Core.dir/build.make:4394: CMakeFiles/WRF_Core.dir/external/RSL_LITE/feedback_domain_em_part1.F.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:811: CMakeFiles/WRF_Core.dir/all] Error 2
```

Cheers,

Soren

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Soren Rasmussen, Ph.D.

Hydrometeorological Applications Program

Research Applications Laboratory

NSF National Center for Atmospheric Research (NCAR)

Will H

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Jan 29, 2025, 12:48:23 PMJan 29

to wrf-hyd...@ucar.edu

can you write out the exact steps i need to follow?

i based it off of this tutorial that's the only one on ncar's website

in it says to build hydro then move the contents to the hydro folder of wrf then run the installation of WRF

howtobuildandrunwrfhydrov511coupledtowrf.pdf

Soren Rasmussen

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Jan 29, 2025, 1:05:00 PMJan 29

to wrf-hyd...@ucar.edu

Hi Will,

That PDF is an older version, we've recently switched to readthedocs documentation and are in the process of purging older PDFs from our websites. I think Appendices: A1 Coupled WRF | WRF-Hydro: Compiling the Code section will be helpful. I would check out the "4a. Configure WRF: CMake (preferred method)" section. For the new ifx compiler I used the following but there seems to be an Internal Compiler Error (ICE) so I would use the "-p gfortran/gcc" or "-p ifort/icc" options (I think that is the older Intel compiler option).

```

./configure_new -x \
-p oneapi \
-- -DWRF_CORE=ARW -DWRF_NESTING=BASIC -DENABLE_HYDRO=ON -DWRF_CASE=EM_REAL

./compile_new

```

Apologies for the slower replies! This week is very busy but I'll try to answer as soon as possible to any responses.

Cheers,

Soren

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CAL2tjkhzEqnFUKM952XScxr1%2BJddScOjY-xBS93Xo4xEfgfCbw%40mail.gmail.com.

Will H

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Jan 30, 2025, 11:51:36 AMJan 30

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i'm a little confused about the instructions for coupling the model. When it says to build wrf hydro first then move the source folder. Do I move the source folder from the build directory or from the unbuilt directory?

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CADwawey10Z3R26QwgyaEKDgcdaJwCoFYx%3DzC662hHdVX0iOXpg%40mail.gmail.com.

Soren Rasmussen

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Jan 30, 2025, 1:42:30 PMJan 30

to wrf-hyd...@ucar.edu

Hi Will,

I think Step 0 from "Compiling the Code" is incorrect and can be skipped (I'll need to update the docs). https://wrf-hydro.readthedocs.io/en/latest/appendices.html#compiling-the-code.

Step 2 under "Compiling the Code" moves the unbuilt source directory to replace the "hydro/" directory. Then you can use CMake to configure.

$ rm -r hydro
$ cp -r ../wrf_hydro*/src hydro

Hopefully those commands should work for you, if you have any questions/issues please let use know!

Cheers,
Soren

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CAL2tjkgNkgm_cry1GYS1XqK%2BBMEA3X%2Ba0cxrSPke%3DvBT90teKA%40mail.gmail.com.

Will H

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Jan 30, 2025, 5:23:29 PMJan 30

to wrf-hyd...@ucar.edu

Good afternoon Soren,

Thank you for clarifying that it needs to be the unbuilt source directory, I will test it out and get back to you

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CADwawew3Oka%2BFEnNrRxuLDFZBrnyQYUSFhnQFFHKF-jzAu3rjA%40mail.gmail.com.

Will H

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Jan 30, 2025, 5:49:18 PMJan 30

to wrf-hyd...@ucar.edu

Here are the commands I am issuing and the error I am getting:

error.txt

Will H

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Jan 30, 2025, 6:35:01 PMJan 30

to wrf-hyd...@ucar.edu

I've tried several different ways,

strictly the new method, mixed between old and new, and old method all using cloning of the github and it fails. The only way that works right now that I can see is the old method with the .tar file

Soren Rasmussen

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Jan 30, 2025, 11:03:33 PMJan 30

to wrf-hyd...@ucar.edu

Hi Will,

I think there might be a few issues. I just tried the latest WRF tarball and it doesn't have the git repo info so the git commands won't work. I needed to do the following to get the v4.6.1 release

$ git clone --branch release-v4.6.1 https://github.com/wrf-model/WRF.git

$ cd WRF

$ git submodule update --init --recursive

Also, while in the past removing the hydro directory and replacing it with the WRF-Hydro release has worked, it seems to be currently broken. I would recommend just using the v4.6.1 hydro directory instead of removing it, it should correspond with the v5.3 WRF-Hydro release. There are just a few differences in the CMake files that are probably causing the issues, I'd expect them to do away in the v5.4 release. Sorry the instructions haven't worked like expected, a number of things are changing for the v5.4 WRF-Hydro release and we're still getting through all the testing and updating.

Cheers,

Soren

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CAL2tjkjU%2BrTrHNP88Os%3DKL9qw5caMi-_BQYgmK_6dTzoj%2B9Ljg%40mail.gmail.com.

Will H

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Jan 31, 2025, 9:50:51 AMJan 31

to wrf-hyd...@ucar.edu

oh you are being very helpful thank you! you're far more responsive then the wrf forum

got another error.

Looks like some of the libraries are not pointing to the right location such as zlib maybe that's the problem?

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CADwawew_X-xdOqPaPkHje0iPsuXFQPYzVK71pLghanZNUx18fQ%40mail.gmail.com.

hydro_stock_error.txt

Will H

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Jan 31, 2025, 10:12:47 AMJan 31

to wrf-hyd...@ucar.edu

Tried it a different way and it still has an error

see the attached text file

cd WRF FOLDER.txt

Soren Rasmussen

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Feb 3, 2025, 10:15:02 PMFeb 3

to wrf-hyd...@ucar.edu

Hi Will,

Do you mind building and using only one process to build with, aka `./compile_new -j 1`. The CMake build was first introduced in WRF 4.6 so building in parallel with too many processes sometimes doesn't work and then building with 1 makes it easier to see exactly where and what the error is. I've only gotten WRF v4.6.1 to build with GCC 12 and 13 so I'm still not sure whether it will work with oneAPI's ifx (our system Derecho is giving some weird errors) but it might work.

Thanks! - Soren

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CAL2tjkijy%3DWAoN%2BWVK3GarUerWpm3%2BBSqMGkfakSkLyUxGpcHQ%40mail.gmail.com.

Will H

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Feb 4, 2025, 8:37:05 AMFeb 4

to wrf-hyd...@ucar.edu

workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$
cd "${WRF_FOLDER}"
git clone https://github.com/wrf-model/WRF.git

cd WRF

git submodule update --init --recursive

#If statment for changing folder name
if [ -d ""${WRF_FOLDER}"/WRF" ]; then
mv -f "${WRF_FOLDER}"/WRF "${WRF_FOLDER}"/WRFV${WRF_VERSION}
fi

cd "${WRF_FOLDER}"/WRFV${WRF_VERSION}
Cloning into 'WRF'...
remote: Enumerating objects: 64441, done.
remote: Counting objects: 100% (438/438), done.
remote: Compressing objects: 100% (283/283), done.
remote: Total 64441 (delta 297), reused 155 (delta 155), pack-reused 64003 (from 4)
Receiving objects: 100% (64441/64441), 269.66 MiB | 38.57 MiB/s, done.
Resolving deltas: 100% (49732/49732), done.
Submodule '.ci/hpc-workflows' (https://github.com/islas/hpc-workflows) registered for path '.ci/hpc-workflows'
Submodule 'phys/noahmp' (https://github.com/NCAR/noahmp) registered for path 'phys/noahmp'
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/.ci/hpc-workflows'...
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/phys/noahmp'...
Submodule path '.ci/hpc-workflows': checked out 'dfc8e6d823b80497ea41bab94e1fdf3f4594ad18'
Submodule path 'phys/noahmp': checked out '848f54ad3d28c4303151fe5ad83724e232694422'
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./configure_new -x -p "oneAPI LLVM" -- -DZLIB_ROOT=$DIR/grib2 -DJASPER_DIR=$DIR/grib2 -DHDF5_ROOT=$DIR/grib2 -DPNETCDF_DIR=$DIR/grib2 -DCMAKE_Fortran_COMPILER=ifx -DMPI_Fortran_COMPILER=mpiifx -DMPI_C_COMPILER=mpiicx -DWRF_CORE=ARW -DWRF_NESTING=BASIC -DWRF_CASE=EM_REAL -DWRFIO_NCD_LARGE_FILE_SUPPORT=1 -DUSE_MPI=ON -DSPATIAL_SOIL=1 -DENABLE_HYDRO=ON
Using default build directory : _build
Using default install directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/install
Using preselected config oneAPI LLVM
Linux ifx / icx / mpif90 / mpicc INTEL (ifx/icx) : oneAPI LLVM
-- The C compiler identification is IntelLLVM 2025.0.4
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/intel/oneapi/compiler/2025.0/bin/icx - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- The CXX compiler identification is IntelLLVM 2025.0.4
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/intel/oneapi/compiler/2025.0/bin/icpx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- The Fortran compiler identification is IntelLLVM 2025.0.4
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /opt/intel/oneapi/compiler/2025.0/bin/ifx - skipped
-- Retrieving git information...
-- git SHA : v4.6.1-0-gd66e442fccc04111067e29274c9f9eaccc3cef28
-- git diff :
-- Setting project version to 4.6.1
-- Set default build type to Release
-- netCDF large file support not suppressed, if available it will be used
-- Found MPI_C: /opt/intel/oneapi/mpi/2021.14/lib/libmpi.so (found version "3.1")
-- Found MPI_Fortran: /opt/intel/oneapi/mpi/2021.14/lib/libmpifort.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1") found components: Fortran C
-- Checking if MPI requires IPO
-- Found NETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nc-config
-- Found netCDF: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.9.2")
-- Found NETCDF-FORTRAN_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nf-config
-- Found netCDF-Fortran: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.6.1")
-- Found PNETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/bin/pnetcdf-config
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.3")
-- Found CURL: /usr/lib/x86_64-linux-gnu/libcurl.so (found version "8.5.0")
-- WRF_CONFIG : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build/wrf_config.cmake
-- CMAKE_BUILD_TYPE : Release
-- WRF_CORE : ARW
-- WRF_NESTING : BASIC
-- WRF_CASE : EM_REAL
-- USE_DOUBLE : OFF
-- USE_MPI : ON
-- USE_OPENMP : OFF
-- USE_IPO : OFF
-- ENABLE_CHEM : OFF
-- ENABLE_CLM :
-- ENABLE_CMAQ : OFF
-- ENABLE_DFI_RADAR : OFF
-- ENABLE_HYDRO : ON
-- ENABLE_KPP : OFF
-- ENABLE_MARS : OFF
-- ENABLE_TERRAIN : OFF
-- ENABLE_TITAN : OFF
-- ENABLE_VENUS : OFF
-- USE_ALLOCATABLES : ON
-- wrfmodel : ON
-- GRIB1 : ON
-- INTIO : ON
-- KEEP_INT_AROUND : ON
-- LIMIT_ARGS : ON
-- FORCE_NETCDF_CLASSIC : OFF
-- BUILD_RRTMG_FAST : OFF
-- BUILD_RRTMK : OFF
-- BUILD_SBM_FAST : ON
-- SHOW_ALL_VARS_USED : OFF
-- WRFIO_NCD_NO_LARGE_FILE_SUPPORT : OFF
-- Performing Test Fortran_2003_IEEE
-- Performing Test Fortran_2003_IEEE - Success
-- Performing Test Fortran_2003_ISO_C
-- Performing Test Fortran_2003_ISO_C - Success
-- Performing Test Fortran_2003_FLUSH
-- Performing Test Fortran_2003_FLUSH - Success
-- Performing Test Fortran_2003_GAMMA
-- Performing Test Fortran_2003_GAMMA - Success
-- Performing Test FSEEKO64
-- Performing Test FSEEKO64 - Success
-- Adding [io_netcdfpar] to configuration
-- Adding [io_pnetcdf] to configuration
-- Setting gen_comms to RSL_LITE
-- Setting module_dm to RSL_LITE
-- Configuring done (2.8s)
-- Generating done (0.1s)
CMake Warning:
Manually-specified variables were not used by the project:

HDF5_ROOT
JASPER_DIR
PNETCDF_DIR
SPATIAL_SOIL
WRFIO_NCD_LARGE_FILE_SUPPORT

-- Build files have been written to: /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./compile_new -j 1
Using default build directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/CPL_WRF.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/hashtable.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/mpp_land.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_GWBUCKET.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_ReachLS.F90.o
[ 1%] Linking Fortran static library libhydro_mpp.a
[ 1%] Built target hydro_mpp
[ 1%] Building Fortran object hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o
/home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90(10): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [MPI]
use module_mpp_land
------------^
compilation aborted for /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90 (code 1)
make[2]: *** [hydro/utils/CMakeFiles/hydro_utils.dir/build.make:88: hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:1977: hydro/utils/CMakeFiles/hydro_utils.dir/all] Error 2
make: *** [Makefile:136: all] Error 2

############################################################################

workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel$
cd "${WRF_FOLDER}"
git clone https://github.com/wrf-model/WRF.git

cd WRF

git submodule update --init --recursive

Cloning into 'WRF'...
remote: Enumerating objects: 64441, done.
remote: Counting objects: 100% (437/437), done.
remote: Compressing objects: 100% (284/284), done.
remote: Total 64441 (delta 297), reused 153 (delta 153), pack-reused 64004 (from 4)
Receiving objects: 100% (64441/64441), 269.66 MiB | 37.22 MiB/s, done.
Resolving deltas: 100% (49738/49738), done.
Submodule '.ci/hpc-workflows' (https://github.com/islas/hpc-workflows) registered for path '.ci/hpc-workflows'
Submodule 'phys/noahmp' (https://github.com/NCAR/noahmp) registered for path 'phys/noahmp'
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/.ci/hpc-workflows'...
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/phys/noahmp'...
Submodule path '.ci/hpc-workflows': checked out 'dfc8e6d823b80497ea41bab94e1fdf3f4594ad18'
Submodule path 'phys/noahmp': checked out '848f54ad3d28c4303151fe5ad83724e232694422'
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRF$
#If statment for changing folder name
if [ -d ""${WRF_FOLDER}"/WRF" ]; then
mv -f "${WRF_FOLDER}"/WRF "${WRF_FOLDER}"/WRFV${WRF_VERSION}
fi

cd "${WRF_FOLDER}"/WRFV${WRF_VERSION}
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./configure_new
Using default build directory : _build
Using default install directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/install
0 Linux gfortran / gcc / mpif90 / mpicc GNU (gfortran/gcc)
1 Linux ifx / icx / mpif90 / mpicc INTEL (ifx/icx) : oneAPI LLVM
!! - Compiler not found, some configurations will not work and will be hidden
Select configuration [0-1] Default [0] (note !!) : 1
Select option for WRF_CORE from WRF_CORE_OPTIONS [0-4]
0 : ARW
1 : CONVERT
2 : DA
3 : DA_4D_VAR
4 : PLUS
Default [0] : 0
Select option for WRF_NESTING from WRF_NESTING_OPTIONS [0-3]
0 : NONE
1 : BASIC
2 : MOVES
3 : VORTEX
Default [1] : 1
Select option for WRF_CASE from WRF_CASE_OPTIONS [0-14]
0 : EM_REAL
1 : EM_FIRE
2 : EM_SCM_XY
3 : EM_TROPICAL_CYCLONE
4 : EM_HELDSUAREZ
5 : EM_B_WAVE
6 : EM_GRAV2D_X
7 : EM_HILL2D_X
8 : EM_LES
9 : EM_QUARTER_SS
10 : EM_SEABREEZE2D_X
11 : EM_CONVRAD
12 : EM_SQUALL2D_X
13 : EM_SQUALL2D_Y
14 : NONE
Default [0] : 0
[DM] Use MPI? Default [Y] [Y/n] : y
[SM] Use OpenMP? Default [N] [y/N] : n
Configure additional options? Default [N] [y/N] : y
ID Option : Default
0 USE_DOUBLE : OFF
1 USE_HDF5 : OFF
2 USE_JASPER : OFF
3 USE_PIO : OFF
4 USE_IPO : OFF
5 ENABLE_CHEM : OFF
6 ENABLE_CMAQ : OFF
7 ENABLE_CTSM : OFF
8 ENABLE_DFI_RADAR : OFF
9 ENABLE_HYDRO : OFF
10 ENABLE_KPP : OFF
11 ENABLE_MARS : OFF
12 ENABLE_TERRAIN : OFF
13 ENABLE_TITAN : OFF
14 ENABLE_VENUS : OFF
15 USE_ALLOCATABLES : ON
16 wrfmodel : ON
17 GRIB1 : ON
18 INTIO : ON
19 KEEP_INT_AROUND : ON
20 LIMIT_ARGS : ON
21 WRFIO_NCD_NO_LARGE_FILE_SUPPORT : OFF
22 FORCE_NETCDF_CLASSIC : OFF
23 BUILD_RRTMG_FAST : OFF
24 BUILD_RRTMK : OFF
25 BUILD_SBM_FAST : ON
26 SHOW_ALL_VARS_USED : OFF
27 PROFILE_COMPILATION : OFF
Enter ID to toggle option on or off, q to quit :
1
Set USE_HDF5 to ON
2
Set USE_JASPER to ON
9
Set ENABLE_HYDRO to ON
q
-- The C compiler identification is IntelLLVM 2025.0.4
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/intel/oneapi/compiler/2025.0/bin/icx - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- The CXX compiler identification is IntelLLVM 2025.0.4
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/intel/oneapi/compiler/2025.0/bin/icpx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- The Fortran compiler identification is IntelLLVM 2025.0.4
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /opt/intel/oneapi/compiler/2025.0/bin/ifx - skipped
-- Retrieving git information...
-- git SHA : v4.6.1-0-gd66e442fccc04111067e29274c9f9eaccc3cef28
-- git diff :
-- Setting project version to 4.6.1
-- Set default build type to Release
-- netCDF large file support not suppressed, if available it will be used
-- Found MPI_C: /opt/intel/oneapi/mpi/2021.14/lib/libmpi.so (found version "3.1")
-- Found MPI_Fortran: /opt/intel/oneapi/mpi/2021.14/lib/libmpifort.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1") found components: Fortran C
-- Checking if MPI requires IPO
-- Found HDF5: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libhdf5.so;/home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.4-3")
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Found Jasper: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libjasper.a (found suitable version "1.900.1", required range is "1.900.1...<1.900.24")
-- Found NETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nc-config
-- Found netCDF: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.9.2")
-- Found NETCDF-FORTRAN_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nf-config
-- Found netCDF-Fortran: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.6.1")
-- Found PNETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/bin/pnetcdf-config
-- Found ZLIB: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libz.so (found version "1.3.1")
-- Found CURL: /usr/lib/x86_64-linux-gnu/libcurl.so (found version "8.5.0")
-- WRF_CONFIG : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build/wrf_config.cmake
-- CMAKE_BUILD_TYPE : Release
-- WRF_CORE : ARW
-- WRF_NESTING : BASIC
-- WRF_CASE : EM_REAL
-- USE_DOUBLE : OFF
-- USE_MPI : ON
-- USE_OPENMP : OFF
-- USE_IPO : OFF
-- ENABLE_CHEM : OFF
-- ENABLE_CLM :
-- ENABLE_CMAQ : OFF
-- ENABLE_DFI_RADAR : OFF
-- ENABLE_HYDRO : ON
-- ENABLE_KPP : OFF
-- ENABLE_MARS : OFF
-- ENABLE_TERRAIN : OFF
-- ENABLE_TITAN : OFF
-- ENABLE_VENUS : OFF
-- USE_ALLOCATABLES : ON
-- wrfmodel : ON
-- GRIB1 : ON
-- INTIO : ON
-- KEEP_INT_AROUND : ON
-- LIMIT_ARGS : ON
-- FORCE_NETCDF_CLASSIC : OFF
-- BUILD_RRTMG_FAST : OFF
-- BUILD_RRTMK : OFF
-- BUILD_SBM_FAST : ON
-- SHOW_ALL_VARS_USED : OFF
-- WRFIO_NCD_NO_LARGE_FILE_SUPPORT : OFF
-- Performing Test Fortran_2003_IEEE
-- Performing Test Fortran_2003_IEEE - Success
-- Performing Test Fortran_2003_ISO_C
-- Performing Test Fortran_2003_ISO_C - Success
-- Performing Test Fortran_2003_FLUSH
-- Performing Test Fortran_2003_FLUSH - Success
-- Performing Test Fortran_2003_GAMMA
-- Performing Test Fortran_2003_GAMMA - Success
-- Performing Test FSEEKO64
-- Performing Test FSEEKO64 - Success
-- Adding [io_netcdfpar] to configuration
-- Adding [io_pnetcdf] to configuration
-- Adding [io_phdf5] to configuration
-- Adding [io_grib2] to configuration
-- Setting gen_comms to RSL_LITE
-- Setting module_dm to RSL_LITE
-- Configuring done (2.8s)
-- Generating done (0.1s)
-- Build files have been written to: /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./compile_new -j 1
Using default build directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/CPL_WRF.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/hashtable.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/mpp_land.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_GWBUCKET.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_ReachLS.F90.o
[ 1%] Linking Fortran static library libhydro_mpp.a
[ 1%] Built target hydro_mpp
[ 1%] Building Fortran object hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o
/home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90(10): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [MPI]
use module_mpp_land
------------^
compilation aborted for /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90 (code 1)
make[2]: *** [hydro/utils/CMakeFiles/hydro_utils.dir/build.make:88: hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:2100: hydro/utils/CMakeFiles/hydro_utils.dir/all] Error 2
make: *** [Makefile:136: all] Error 2

#################################################################

workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel$
cd "${WRF_FOLDER}"
git clone https://github.com/wrf-model/WRF.git

cd WRF

git submodule update --init --recursive

#If statment for changing folder name
if [ -d ""${WRF_FOLDER}"/WRF" ]; then
mv -f "${WRF_FOLDER}"/WRF "${WRF_FOLDER}"/WRFV${WRF_VERSION}
fi

cd "${WRF_FOLDER}"/WRFV${WRF_VERSION}
Cloning into 'WRF'...
remote: Enumerating objects: 64441, done.
remote: Counting objects: 100% (437/437), done.
remote: Compressing objects: 100% (284/284), done.
remote: Total 64441 (delta 297), reused 153 (delta 153), pack-reused 64004 (from 4)
Receiving objects: 100% (64441/64441), 269.66 MiB | 48.10 MiB/s, done.
Resolving deltas: 100% (49738/49738), done.
Submodule '.ci/hpc-workflows' (https://github.com/islas/hpc-workflows) registered for path '.ci/hpc-workflows'
Submodule 'phys/noahmp' (https://github.com/NCAR/noahmp) registered for path 'phys/noahmp'
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/.ci/hpc-workflows'...
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/phys/noahmp'...
Submodule path '.ci/hpc-workflows': checked out 'dfc8e6d823b80497ea41bab94e1fdf3f4594ad18'
Submodule path 'phys/noahmp': checked out '848f54ad3d28c4303151fe5ad83724e232694422'
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$
cp -rf "${WRF_FOLDER}"/Hydro-Basecode/wrf_hydro_nwm_public/src/* "${WRF_FOLDER}"/WRFV${WRF_VERSION}/hydro
cp -rf "${WRF_FOLDER}"/Hydro-Basecode/wrf_hydro_nwm_public/build/src/* "${WRF_FOLDER}"/WRFV${WRF_VERSION}/hydro
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$
export ZLIB_ROOT=$DIR/grib2
export JASPER_DIR=$DIR/grib2
export HDF5_ROOT=$DIR/grib2
export PNETCDF_DIR=$DIR/grib2
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./configure_new
Using default build directory : _build
Using default install directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/install
0 Linux gfortran / gcc / mpif90 / mpicc GNU (gfortran/gcc)
1 Linux ifx / icx / mpif90 / mpicc INTEL (ifx/icx) : oneAPI LLVM
!! - Compiler not found, some configurations will not work and will be hidden
Select configuration [0-1] Default [0] (note !!) : 1
Select option for WRF_CORE from WRF_CORE_OPTIONS [0-4]
0 : ARW
1 : CONVERT
2 : DA
3 : DA_4D_VAR
4 : PLUS
Default [0] : 0
Select option for WRF_NESTING from WRF_NESTING_OPTIONS [0-3]
0 : NONE
1 : BASIC
2 : MOVES
3 : VORTEX
Default [1] : 1
Select option for WRF_CASE from WRF_CASE_OPTIONS [0-14]
0 : EM_REAL
1 : EM_FIRE
2 : EM_SCM_XY
3 : EM_TROPICAL_CYCLONE
4 : EM_HELDSUAREZ
5 : EM_B_WAVE
6 : EM_GRAV2D_X
7 : EM_HILL2D_X
8 : EM_LES
9 : EM_QUARTER_SS
10 : EM_SEABREEZE2D_X
11 : EM_CONVRAD
12 : EM_SQUALL2D_X
13 : EM_SQUALL2D_Y
14 : NONE
Default [0] : 0
[DM] Use MPI? Default [Y] [Y/n] : y
[SM] Use OpenMP? Default [N] [y/N] : n
Configure additional options? Default [N] [y/N] : y
ID Option : Default
0 USE_DOUBLE : OFF
1 USE_HDF5 : OFF
2 USE_JASPER : OFF
3 USE_PIO : OFF
4 USE_IPO : OFF
5 ENABLE_CHEM : OFF
6 ENABLE_CMAQ : OFF
7 ENABLE_CTSM : OFF
8 ENABLE_DFI_RADAR : OFF
9 ENABLE_HYDRO : OFF
10 ENABLE_KPP : OFF
11 ENABLE_MARS : OFF
12 ENABLE_TERRAIN : OFF
13 ENABLE_TITAN : OFF
14 ENABLE_VENUS : OFF
15 USE_ALLOCATABLES : ON
16 wrfmodel : ON
17 GRIB1 : ON
18 INTIO : ON
19 KEEP_INT_AROUND : ON
20 LIMIT_ARGS : ON
21 WRFIO_NCD_NO_LARGE_FILE_SUPPORT : OFF
22 FORCE_NETCDF_CLASSIC : OFF
23 BUILD_RRTMG_FAST : OFF
24 BUILD_RRTMK : OFF
25 BUILD_SBM_FAST : ON
26 SHOW_ALL_VARS_USED : OFF
27 PROFILE_COMPILATION : OFF
Enter ID to toggle option on or off, q to quit :
1
Set USE_HDF5 to ON
2
Set USE_JASPER to ON
9
Set ENABLE_HYDRO to ON
q
-- The C compiler identification is IntelLLVM 2025.0.4
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/intel/oneapi/compiler/2025.0/bin/icx - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- The CXX compiler identification is IntelLLVM 2025.0.4
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/intel/oneapi/compiler/2025.0/bin/icpx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- The Fortran compiler identification is IntelLLVM 2025.0.4
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /opt/intel/oneapi/compiler/2025.0/bin/ifx - skipped
-- Retrieving git information...
-- git SHA : v4.6.1-0-gd66e442fccc04111067e29274c9f9eaccc3cef28-dirty
-- git diff : 62 files changed, 6300 insertions(+), 2951 deletions(-)
-- Setting project version to 4.6.1
-- Set default build type to Release
-- netCDF large file support not suppressed, if available it will be used
-- Found MPI_C: /opt/intel/oneapi/mpi/2021.14/lib/libmpi.so (found version "3.1")
-- Found MPI_Fortran: /opt/intel/oneapi/mpi/2021.14/lib/libmpifort.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1") found components: Fortran C
-- Checking if MPI requires IPO
-- Found HDF5: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libhdf5.so;/home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.4-3")
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Found Jasper: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libjasper.a (found suitable version "1.900.1", required range is "1.900.1...<1.900.24")
-- Found NETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nc-config
-- Found netCDF: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.9.2")
-- Found NETCDF-FORTRAN_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nf-config
-- Found netCDF-Fortran: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.6.1")
-- Found PNETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/bin/pnetcdf-config
-- Found ZLIB: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libz.so (found version "1.3.1")
-- Found CURL: /usr/lib/x86_64-linux-gnu/libcurl.so (found version "8.5.0")
-- WRF_CONFIG : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build/wrf_config.cmake
-- CMAKE_BUILD_TYPE : Release
-- WRF_CORE : ARW
-- WRF_NESTING : BASIC
-- WRF_CASE : EM_REAL
-- USE_DOUBLE : OFF
-- USE_MPI : ON
-- USE_OPENMP : OFF
-- USE_IPO : OFF
-- ENABLE_CHEM : OFF
-- ENABLE_CLM :
-- ENABLE_CMAQ : OFF
-- ENABLE_DFI_RADAR : OFF
-- ENABLE_HYDRO : ON
-- ENABLE_KPP : OFF
-- ENABLE_MARS : OFF
-- ENABLE_TERRAIN : OFF
-- ENABLE_TITAN : OFF
-- ENABLE_VENUS : OFF
-- USE_ALLOCATABLES : ON
-- wrfmodel : ON
-- GRIB1 : ON
-- INTIO : ON
-- KEEP_INT_AROUND : ON
-- LIMIT_ARGS : ON
-- FORCE_NETCDF_CLASSIC : OFF
-- BUILD_RRTMG_FAST : OFF
-- BUILD_RRTMK : OFF
-- BUILD_SBM_FAST : ON
-- SHOW_ALL_VARS_USED : OFF
-- WRFIO_NCD_NO_LARGE_FILE_SUPPORT : OFF
-- Performing Test Fortran_2003_IEEE
-- Performing Test Fortran_2003_IEEE - Success
-- Performing Test Fortran_2003_ISO_C
-- Performing Test Fortran_2003_ISO_C - Success
-- Performing Test Fortran_2003_FLUSH
-- Performing Test Fortran_2003_FLUSH - Success
-- Performing Test Fortran_2003_GAMMA
-- Performing Test Fortran_2003_GAMMA - Success
-- Performing Test FSEEKO64
-- Performing Test FSEEKO64 - Success
-- Adding [io_netcdfpar] to configuration
-- Adding [io_pnetcdf] to configuration
-- Adding [io_phdf5] to configuration
-- Adding [io_grib2] to configuration
-- Setting gen_comms to RSL_LITE
-- Setting module_dm to RSL_LITE
-- Configuring done (2.8s)
-- Generating done (0.1s)
-- Build files have been written to: /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./compile_new
Using default build directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/CPL_WRF.F90.o
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/hashtable.F90.o
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/mpp_land.F90.o
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_GWBUCKET.F90.o
[ 1%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_ReachLS.F90.o
[ 1%] Linking Fortran static library libhydro_mpp.a
[ 1%] Built target hydro_mpp
[ 1%] Building Fortran object hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o
/home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90(10): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [MPI]
use module_mpp_land
------------^
compilation aborted for /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90 (code 1)
make[2]: *** [hydro/utils/CMakeFiles/hydro_utils.dir/build.make:88: hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:2137: hydro/utils/CMakeFiles/hydro_utils.dir/all] Error 2
make: *** [Makefile:136: all] Error 2

##############################################################################
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel$
cd "${WRF_FOLDER}"
git clone https://github.com/wrf-model/WRF.git

cd WRF

git submodule update --init --recursive

Cloning into 'WRF'...
remote: Enumerating objects: 64441, done.
remote: Counting objects: 100% (438/438), done.
remote: Compressing objects: 100% (283/283), done.
remote: Total 64441 (delta 297), reused 155 (delta 155), pack-reused 64003 (from 4)
Receiving objects: 100% (64441/64441), 269.66 MiB | 38.27 MiB/s, done.
Resolving deltas: 100% (49732/49732), done.
Submodule '.ci/hpc-workflows' (https://github.com/islas/hpc-workflows) registered for path '.ci/hpc-workflows'
Submodule 'phys/noahmp' (https://github.com/NCAR/noahmp) registered for path 'phys/noahmp'
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/.ci/hpc-workflows'...
Cloning into '/home/workhorse/WRFHYDRO_COUPLED_Intel/WRF/phys/noahmp'...
Submodule path '.ci/hpc-workflows': checked out 'dfc8e6d823b80497ea41bab94e1fdf3f4594ad18'
Submodule path 'phys/noahmp': checked out '848f54ad3d28c4303151fe5ad83724e232694422'
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRF$

#If statment for changing folder name
if [ -d ""${WRF_FOLDER}"/WRF" ]; then
mv -f "${WRF_FOLDER}"/WRF "${WRF_FOLDER}"/WRFV${WRF_VERSION}
fi

cd "${WRF_FOLDER}"/WRFV${WRF_VERSION}

workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$
export ZLIB_ROOT=$DIR/grib2
export JASPER_DIR=$DIR/grib2
export HDF5_ROOT=$DIR/grib2
export PNETCDF_DIR=$DIR/grib2
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ cp -rf "${WRF_FOLDER}"/Hydro-Basecode/wrf_hydro_nwm_public/src/* "${WRF_FOLDER}"/WRFV${WRF_VERSION}/hydro
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ cp -rf "${WRF_FOLDER}"/Hydro-Basecode/wrf_hydro_nwm_public/build/* "${WRF_FOLDER}"/WRFV${WRF_VERSION}/hydro
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ cp -rf "${WRF_FOLDER}"/Hydro-Basecode/wrf_hydro_nwm_public/build/src/* "${WRF_FOLDER}"/WRFV${WRF_VERSION}/hydro
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$
./configure_new -x -p "oneAPI LLVM" -- -DCMAKE_Fortran_COMPILER=ifx -DMPI_Fortran_COMPILER=mpiifx -DMPI_C_COMPILER=mpiicx -DWRF_CORE=ARW -DWRF_NESTING=BASIC -DWRF_CASE=EM_REAL -DUSE_MPI=ON -DENABLE_HYDRO=ON
Using default build directory : _build
Using default install directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/install
Using preselected config oneAPI LLVM
Linux ifx / icx / mpif90 / mpicc INTEL (ifx/icx) : oneAPI LLVM
-- The C compiler identification is IntelLLVM 2025.0.4
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/intel/oneapi/compiler/2025.0/bin/icx - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- The CXX compiler identification is IntelLLVM 2025.0.4
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/intel/oneapi/compiler/2025.0/bin/icpx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- The Fortran compiler identification is IntelLLVM 2025.0.4
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /opt/intel/oneapi/compiler/2025.0/bin/ifx - skipped
-- Retrieving git information...
-- git SHA : v4.6.1-0-gd66e442fccc04111067e29274c9f9eaccc3cef28-dirty
-- git diff : 62 files changed, 6300 insertions(+), 2951 deletions(-)
-- Setting project version to 4.6.1
-- Set default build type to Release
-- netCDF large file support not suppressed, if available it will be used
-- Found MPI_C: /opt/intel/oneapi/mpi/2021.14/lib/libmpi.so (found version "3.1")
-- Found MPI_Fortran: /opt/intel/oneapi/mpi/2021.14/lib/libmpifort.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1") found components: Fortran C
-- Checking if MPI requires IPO
-- Found NETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nc-config
-- Found netCDF: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.9.2")
-- Found NETCDF-FORTRAN_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/bin/nf-config
-- Found netCDF-Fortran: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/NETCDF/include (found version "4.6.1")
-- Found PNETCDF_PROGRAM : /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/bin/pnetcdf-config
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Found ZLIB: /home/workhorse/WRFHYDRO_COUPLED_Intel/Libs/grib2/lib/libz.so (found version "1.3.1")
-- Found CURL: /usr/lib/x86_64-linux-gnu/libcurl.so (found version "8.5.0")
-- WRF_CONFIG : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build/wrf_config.cmake
-- CMAKE_BUILD_TYPE : Release
-- WRF_CORE : ARW
-- WRF_NESTING : BASIC
-- WRF_CASE : EM_REAL
-- USE_DOUBLE : OFF
-- USE_MPI : ON
-- USE_OPENMP : OFF
-- USE_IPO : OFF
-- ENABLE_CHEM : OFF
-- ENABLE_CLM :
-- ENABLE_CMAQ : OFF
-- ENABLE_DFI_RADAR : OFF
-- ENABLE_HYDRO : ON
-- ENABLE_KPP : OFF
-- ENABLE_MARS : OFF
-- ENABLE_TERRAIN : OFF
-- ENABLE_TITAN : OFF
-- ENABLE_VENUS : OFF
-- USE_ALLOCATABLES : ON
-- wrfmodel : ON
-- GRIB1 : ON
-- INTIO : ON
-- KEEP_INT_AROUND : ON
-- LIMIT_ARGS : ON
-- FORCE_NETCDF_CLASSIC : OFF
-- BUILD_RRTMG_FAST : OFF
-- BUILD_RRTMK : OFF
-- BUILD_SBM_FAST : ON
-- SHOW_ALL_VARS_USED : OFF
-- WRFIO_NCD_NO_LARGE_FILE_SUPPORT : OFF
-- Performing Test Fortran_2003_IEEE
-- Performing Test Fortran_2003_IEEE - Success
-- Performing Test Fortran_2003_ISO_C
-- Performing Test Fortran_2003_ISO_C - Success
-- Performing Test Fortran_2003_FLUSH
-- Performing Test Fortran_2003_FLUSH - Success
-- Performing Test Fortran_2003_GAMMA
-- Performing Test Fortran_2003_GAMMA - Success
-- Performing Test FSEEKO64
-- Performing Test FSEEKO64 - Success
-- Adding [io_netcdfpar] to configuration
-- Adding [io_pnetcdf] to configuration
-- Setting gen_comms to RSL_LITE
-- Setting module_dm to RSL_LITE
-- Configuring done (2.7s)
-- Generating done (0.1s)
-- Build files have been written to: /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./compile_new -j 1
Using default build directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/CPL_WRF.F90.o
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/hashtable.F90.o
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/mpp_land.F90.o
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_GWBUCKET.F90.o
[ 0%] Building Fortran object hydro/MPP/CMakeFiles/hydro_mpp.dir/module_mpp_ReachLS.F90.o
[ 0%] Linking Fortran static library libhydro_mpp.a
[ 0%] Built target hydro_mpp
[ 0%] Building Fortran object hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o
/home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90(10): error #7002: Error in opening the compiled module file. Check INCLUDE paths. [MPI]
use module_mpp_land
------------^
compilation aborted for /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/utils/module_hydro_stop.F90 (code 1)
make[2]: *** [hydro/utils/CMakeFiles/hydro_utils.dir/build.make:88: hydro/utils/CMakeFiles/hydro_utils.dir/module_hydro_stop.F90.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:2014: hydro/utils/CMakeFiles/hydro_utils.dir/all] Error 2
make: *** [Makefile:136: all] Error 2

I have tried using stock hydro, compiled hydro from the github and using configure new with the different options listed all above and nothing works. I'm stuck. Any help you can provide would be appreciated!

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CADwawexrdQiymLGRrYemvnXQxDPQw9ceHW85nwB6aFPWhGKJsQ%40mail.gmail.com.

Will H

unread,

Feb 5, 2025, 10:34:00 AMFeb 5

to wrf-hyd...@ucar.edu

Minor update, makes it all the way to the end then this happens

# Source Intel oneAPI environment
source /opt/intel/oneapi/setvars.sh --force

# Set up NETCDF environment variables
export NETCDF_INC="$DIR/NETCDF/include"
export NETCDF_LIB="$DIR/NETCDF/lib"

# Create directories for Hydro Basecode and navigate to it
mkdir -p "${WRF_FOLDER}/Hydro-Basecode"
cd "${WRF_FOLDER}/Hydro-Basecode"

# Clone the WRF-Hydro repository and set up the build
git clone https://github.com/NCAR/wrf_hydro_nwm_public.git

# Run CMake configuration for WRF-Hydro with specified options
cmake . \
-DSPATIAL_SOIL=1 \
-DWRF_HYDRO=1 \
-DWRFIO_NCD_LARGE_FILE_SUPPORT=1 \
-DCMAKE_Fortran_COMPILER=ifx \
-DWRF_HYDRO_NUDGING=1

# Compile using specified CPU settings
make -j "$CPU_QUARTER_EVEN" 2>&1 | tee make.log

# Check if the necessary executable files were created
cd "${WRF_FOLDER}/Hydro-Basecode/wrf_hydro_nwm_public/Run"
n=$(ls ./*.exe 2>/dev/null | wc -l)

# Function to rerun compilation if files are missing
rebuild_and_check() {
echo "Missing one or more expected files. Running compiler again..."
cd "${WRF_FOLDER}/Hydro-Basecode/wrf_hydro_nwm_public/build"
make -j "$CPU_QUARTER_EVEN" 2>&1 | tee make2.log
cd "${WRF_FOLDER}/Hydro-Basecode/wrf_hydro_nwm_public/build/Run"
n=$(ls ./*.exe 2>/dev/null | wc -l)
}

# IF statement to check that all expected files were created
if ((n == 2)); then
echo "All expected files created."
else
rebuild_and_check
if ((n != 2)); then
echo "Missing one or more expected files. Exiting the script."
read -r -p "Please contact script authors for assistance. Press 'Enter' to exit the script."
exit 1
else
echo "All expected files created after re-compiling."
fi
fi

# Finish the script with a pause
read -r -t 5 -p "Finished installing WRF Hydro Basecode. Waiting for 5 seconds..."

cd "${WRF_FOLDER}"
git clone https://github.com/wrf-model/WRF.git

cd WRF
git submodule update --init --recursive

#If statment for changing folder name
if [ -d ""${WRF_FOLDER}"/WRF" ]; then
mv -f "${WRF_FOLDER}"/WRF "${WRF_FOLDER}"/WRFV${WRF_VERSION}
fi

cd "${WRF_FOLDER}"/WRFV${WRF_VERSION}

cd "${WRF_FOLDER}"/WRFV${WRF_VERSION}

rm -rf hydro
mkdir hydro

cp -rf "${WRF_FOLDER}"/Hydro-Basecode/wrf_hydro_nwm_public/* "${WRF_FOLDER}"/WRFV${WRF_VERSION}/hydro

export ZLIB_ROOT=$DIR/grib2
export JASPER_DIR=$DIR/grib2
export HDF5_ROOT=$DIR/grib2
export PNETCDF_DIR=$DIR/grib2

export WRFIO_NCD_LARGE_FILE_SUPPORT=1

./configure_new -x -p "oneAPI LLVM" -- -DCMAKE_Fortran_COMPILER=ifx -DMPI_Fortran_COMPILER=mpiifx -DMPI_C_COMPILER=mpiicx -DWRF_CORE=ARW -DWRF_NESTING=BASIC -DWRF_CASE=EM_REAL -DUSE_MPI=ON -DENABLE_HYDRO=ON -DSPATIAL_SOIL=1 -DWRF_HYDRO_NUDGING=1

./compile_new -j 1

##################################

workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1$ ./compile_new -j 1
Using default build directory : /home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/_build

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[ 96%] Building Fortran object hydro/src/CMakeFiles/wrfhydro.exe.dir/Land_models/NoahMP/IO_code/main_hrldas_driver.F.o
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ld: ../libWRF_Core.a(module_first_rk_step_part1.F.o): in function `module_first_rk_step_part1_mp_first_rk_step_part1_':
ifxEBDdCD.i:(.text+0xdf61): undefined reference to `wrf_drv_hydro_'
make[2]: *** [main/CMakeFiles/wrf.dir/build.make:134: main/wrf] Error 1
make[1]: *** [CMakeFiles/Makefile2:3479: main/CMakeFiles/wrf.dir/all] Error 2

make: *** [Makefile:136: all] Error 2

#########################

But the files exist that it is looking for i think

workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/src/CPL/WRF_cpl $ pwd

/home/workhorse/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/src/CPL/WRF_cpl

workhorse@workhorse-MS-7D91:~/WRFHYDRO_COUPLED_Intel/WRFV4.6.1/hydro/src/CPL/WRF_cpl $ls -a | sort
.
..
CMakeLists.txt
Makefile
Makefile.cpl
module_wrf_HYDRO_downscale.F90
module_wrf_HYDRO.F90
wrf_drv_HYDRO.F90

Will H

unread,

Feb 6, 2025, 7:54:31 AMFeb 6

to wrf-hyd...@ucar.edu

compile_new_Debug_wrfcoupled.log

Not sure if this helps but here's the debug file

Will H

unread,

Feb 7, 2025, 7:02:55 AMFeb 7

to wrf-hydro_users, Will H

From the WRF FORUM:

https://forum.mmm.ucar.edu/threads/unable-to-compile-wrf-hydro-coupled-with-intel-llvm-compilers.20834/#post-50561

I took a look at this and was able to reproduce it. I think it comes down to the fact that the way ifx handles compiled module files. They are unlike pseudo-header files where an interface need only be defined and any transitive usage of modules within that module are ignored. Instead, when one module imports another, that imported module's module usage also needs to be resolved. Very infuriating stuff making resolving the dependency chain all the more tedious.

I've managed to get it to compile with modifications to the hydro/ cmake files and will put a patch in for v4.7.0 that we are working towards. Once in a branch I will post back here so you may also test it out

Like Quote Reply

Will H

unread,

Mar 7, 2025, 6:22:15 AMMar 7

to wrf-hydro_users, Will H

Any ideas Soren?

Will H

unread,

Mar 11, 2025, 5:47:48 PMMar 11

to wrf-hyd...@ucar.edu

Good afternoon Soren,

I don't know if you have a WRF forum account but could you take a look at this post I'm messaging on?

https://forum.mmm.ucar.edu/threads/unable-to-compile-wrf-hydro-coupled-with-intel-llvm-compilers.20834/page-2

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CADwawexrdQiymLGRrYemvnXQxDPQw9ceHW85nwB6aFPWhGKJsQ%40mail.gmail.com.

Soren Rasmussen

unread,

Mar 14, 2025, 7:09:47 PMMar 14

to wrf-hyd...@ucar.edu

Hi Will,

Per the forum's comments, the issue of building WRF with Intel's ifx will be fixed in their v4.7.0 release and just wanted to let you know that we double checked that replacing WRF's hydro/ directory with WRF-Hydro's v5.4.0 src/ directory will also work now. Thanks for reporting this issue and sorry it took so long to sort out, it was a tricky one!

Cheers,

Soren

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CAL2tjkik6ZiS_YAmmRPX1%3DiA8aHYEhvYgNww5hiSn-EsN6FN9w%40mail.gmail.com.

Soren Rasmussen

unread,

Mar 14, 2025, 7:11:20 PMMar 14

to wrf-hyd...@ucar.edu

To clarify, it might not work right now with WRF's current master branch but it will work with their v4.7.0 release once it comes out. - Soren

Will H

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Mar 14, 2025, 9:01:17 PMMar 14

to wrf-hydro_users

Glad to help

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CADwaweyTXG%3DUO6xO7yCTcG30myuOu910CC7%2BEA49xOv%2B%3DPpeCw%40mail.gmail.com.

Will H

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Mar 14, 2025, 9:25:39 PMMar 14

to wrf-hydro_users

Thank you for clarifying. I'm glad I was able to help fix this before the release.

To view this discussion visit https://groups.google.com/a/ucar.edu/d/msgid/wrf-hydro_users/CADwawezUOFz2C0%3Dc-v3b2aPFFeQ_sJf-QZ3365VRnir5xMzwUw%40mail.gmail.com.

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