Simulate lightning flashes and NOx

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Arshini Saikia

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Oct 30, 2017, 2:46:14 PM10/30/17
to wrf-chem-lightning
I want to simulate lightning generated Flashes and NOx over the Eastern Himalayan  foothill regions domain size( latitude : 22-30; longitude :86-100) from april 25, 2012 to may 10, 2012. At first i kept the chemistry option off (without chem) and try to simulate the flashes . I got the IC & CG flashcount in the wrfout file but when i try visualize this i got 0 variables. I don't understand where i made the mistake in the namelist. Your suggestion will be highly appreciate.
Below is the following namelist:
&time_control
 run_days                            = 16,
 run_hours                           = 0,
 run_minutes                         = 0,
 run_seconds                         = 0,
 start_year                          = 2012, 2000, 2000,
 start_month                         = 04,   01,   01,
 start_day                           = 25,   24,   24,
 start_hour                          = 00,   12,   12,
 start_minute                        = 00,   00,   00,
 start_second                        = 00,   00,   00,
 end_year                            = 2012, 2000, 2000,
 end_month                           = 05,   01,   01,
 end_day                             = 11,   25,   25,
 end_hour                            = 00,   12,   12,
 end_minute                          = 00,   00,   00,
 end_second                          = 00,   00,   00,
 interval_seconds                    = 21600
 input_from_file                     = .true.,.true.,.true.,
 history_interval                    = 180,  60,   60,
 frames_per_outfile                  = 1000, 1000, 1000,
 restart                             = .false.,
 restart_interval                    = 5000,
 io_form_history                     = 2
 io_form_restart                     = 2
 io_form_input                       = 2
 io_form_boundary                    = 2
 auxinput6_inname                    = 'wrfbiochemi_d01',
 auxinput7_inname                    = 'wrffirechemi_d<domain>_<date>',
 auxinput5_interval_m                = 60,
 io_form_auxinput2                   = 2,
 io_form_auxinput5                   = 0,
 io_form_auxinput6                   = 0,
 io_form_auxinput7                   = 0,
 frames_per_auxinput7                = 1,
 frames_per_auxinput5                = 1,
 auxinput1_inname                    = 'met_em.d<domain>.<date>',
 debug_level                         = 0
 /

 &domains
 time_step                           = 180,
 time_step_fract_num                 = 0,
 time_step_fract_den                 = 1,
 max_dom                             = 1,
 e_we                                = 146,    112,   94,
 e_sn                                = 98,    97,    91,
 e_vert                              = 31,    30,    30,
 p_top_requested                     = 5000,
 num_metgrid_levels                  = 27,
 num_metgrid_soil_levels             = 4,
 dx                                  = 9000, 10000,  3333.33,
 dy                                  = 9000, 10000,  3333.33,
 grid_id                             = 1,     2,     3,
 parent_id                           = 0,     1,     2,
 i_parent_start                      = 1,     31,    30,
 j_parent_start                      = 1,     17,    30,
 parent_grid_ratio                   = 1,     3,     3,
 parent_time_step_ratio              = 1,     3,     3,
 feedback                            = 1,
 smooth_option                       = 0,
/

&physics
 mp_physics                          = 10,     3,     3,
 progn                               = 1,
 ra_lw_physics                       = 4,     1,     1,
 ra_sw_physics                       = 4,     1,     1,
 radt                                = 30,    30,    30,
 sf_sfclay_physics                   = 1,     1,     1,
 sf_surface_physics                  = 2,     2,     2,
 bl_pbl_physics                      = 1,     1,     1,
 bldt                                = 0,     0,     0,
 cu_physics                          = 5,     1,     0,
 cu_diag                             = 1
 cudt                                = 0,     5,     5,
 ishallow                            = 0,
 isfflx                              = 1,
 ifsnow                              = 0,
 icloud                              = 1,
 surface_input_source                = 1,
 num_soil_layers                     = 4,
 num_land_cat                        = 21,
 sf_urban_physics                    = 0,     0,     0,
 mp_zero_out                         = 2,
 mp_zero_out_thresh                  = 1.e-8,
 maxiens                             = 1,
 maxens                              = 3,
 maxens2                             = 3,
 maxens3                             = 16,
 ensdim                              = 144,
 cu_rad_feedback                     = .true.,
 do_radar_ref                        = 1
 lightning_option                    = 11
 lightning_dt                        = 0.
 lightning_start_seconds             = 600
 cldtop_adjustment                   = 2,
 flashrate_factor                    = 1.0
 iccg_method                         = 2


 /

 &fdda
 /

 &dynamics
 w_damping                           = 0,
 diff_opt                            = 1,      1,      1,
 km_opt                              = 4,      4,      4,
 diff_6th_opt                        = 0,      0,      0,
 diff_6th_factor                     = 0.12,   0.12,   0.12,
 base_temp                           = 290.
 damp_opt                            = 0,
 zdamp                               = 5000.,  5000.,  5000.,
 dampcoef                            = 0.2,    0.2,    0.2
 khdif                               = 0,      0,      0,
 kvdif                               = 0,      0,      0,
 non_hydrostatic                     = .true., .true., .true.,
 moist_adv_opt                       = 1,      1,      1,     
 scalar_adv_opt                      = 1,      1,      1,     
 /

 &bdy_control
 spec_bdy_width                      = 5,
 spec_zone                           = 1,
 relax_zone                          = 4,
 specified                           = .true., .false.,.false.,
 nested                              = .false., .true., .true.,
 /

 &grib2
 /

 &namelist_quilt
 nio_tasks_per_group = 0,
 nio_groups = 1,
 /

Mary Barth

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Oct 30, 2017, 4:09:41 PM10/30/17
to wrf-chem-...@ucar.edu

Dear Arshini,

It looks like the iccg_method should be set differently. Option 2 is specific to the United States. For the Eastern Himalayan region, I recommend using Option 1 and set the IC:CG value via iccg_prescribed_num (numerator) and iccg_prescribed_den (denominator). My recommendation would be:

iccg_method                         = 1

iccg_prescribed_num             = 2

iccg_prescribed_den              = 1

Do you have any information on the IC to CG ratio for your region? If so, that would be more reliable. If not, then my suggested value of IC/CG = 2 is fairly conservative. The Boccippio et al. (2001) paper shows a map for the United States with IC/CG values varying from 1 to 8.

Good luck!

Mary Barth

Mary Barth

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Jan 1, 2018, 7:33:49 PM1/1/18
to Arshini Saikia, wrf-chem-...@ucar.edu

Hello Arshini,

First, I noticed that you are using one domain (max_dom=1) and dx=15km with dt=90seconds. Note that WRF will read only the first column of your namelist settings because max_dom=1.

For dx=15km set the namelist values to:

 lightning_option                   = 11,
 iccg_method                         = 1,
 iccg_prescribed_num            = 2,
 iccg_prescribed_den             = 1,
 lightning_start_seconds        = 600,
 cldtop_adjustment                = 2,
 flashrate_factor                     = 1.0,
 lightning_dt                          = 90,

cellcount_method is not used by the lightning_option = 11. You should either not include it or set it to 0.

The lightning NOx settings that you have look good. Just to repeat them, they are set to:
 lnox_opt                            = 1, 1,
 N_IC                                = 125., 125.,
 N_CG                                = 125., 125.,

-- Mary


On 12/29/17 2:18 PM, Arshini Saikia wrote:
Dear Mam,

As per your suggestion I re-run the model but in wrfoutput i got the IC flashcount and CG flashout value = 0, even lnox_total value is also zero. I attached the edited namelist below. Please give your valuable suggestion.

with regards
Arshini

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Mary Barth                                Phone:  303-497-8186
Senior Scientist                          email: bar...@ucar.edu

National Center for Atmospheric Research                        
P.O. Box 3000                  
Boulder, CO 80307           

https://staff.ucar.edu/users/barthm  
DC3 Web Site:  http://www2.acom.ucar.edu/dc3/
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Mary Barth

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Jan 4, 2018, 3:24:48 PM1/4/18
to Arshini Saikia, wrf-chem-...@ucar.edu

Arshini,

Have you looked at RAINC to see if it is greater than 0? If RAINC = 0, then there's no convective rain and therefore there would not be lightning. If RAINC>0, it may be that ktop (level of neutral buoyancy) is not reaching heights high enough to produce lightning. Do you have KTOP in the output file? If not, you can add it to wrfout (via iofields) and do another run (please make sure I have the correct name/spelling).

You could also set  cldtop_adjustment  = 0 to give higher values of flashrate. (see Wong et al., 2013 for what effect cldtop_adjustment has on the parameterization)

-- Mary


On 1/4/18 12:17 PM, Arshini Saikia wrote:
Dear Mam,

A very wealthy  and healthy New Year to you.

Sorry, still my model run is showing IC_FLASHCOUNT , CG_FLASHCOUNT and lnox_total value zero. Should i try to run my namelist for America, to check weather my namelist is working or not or have some issues. Please share your valuable suggestion.
 with regards
Arshini


To unsubscribe from this group and stop receiving emails from it, send an email to wrf-chem-lightning+unsubscribe@ucar.edu.


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Mary Barth                                Phone:  303-497-8186
Senior Scientist                          email: bar...@ucar.edu

National Center for Atmospheric Research                        
P.O. Box 3000                  
Boulder, CO 80307           

https://staff.ucar.edu/users/barthm  
DC3 Web Site:  http://www2.acom.ucar.edu/dc3/
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