New speciesLabels setting available for bigMaf files

6 views
Skip to first unread message

Brian Lee

unread,
Dec 16, 2021, 4:19:04 PM12/16/21
to track...@soe.ucsc.edu
The bigMaf file format type (http://genome.ucsc.edu/goldenPath/help/bigMaf.html) that stores multiple alignments as a compressed and indexed flavor of bigBed has a documented new setting speciesLabels.

Use speciesLabels to specify new labels that map to sequence names.

Example:

   speciesLabels mm10=mouse_mm10 mm39=mouse_mm39

You can read more about the bigMaf Track Hub settings here: http://genome.ucsc.edu/goldenPath/help/trackDb/trackDbHub.html#bigMaf


Reply all
Reply to author
Forward
0 new messages