I would like to run RepeatMasker on ASM229v1.
Could you please let me know what were the commands that were used to run the opossum RepeatMasker, and what sequence search engine and repeat
database was used for RepeatMasker (also the version of these
programs and database)? Thank you very much!
Best regards,
Mu
Hiram Clawson
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Oct 3, 2022, 1:21:25 PM10/3/22
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to yangmu3, gen...@soe.ucsc.edu
Good Morning Mu:
Please note, this genome assembly is available in the RefSeq version at:
Building species libraries in: Libraries/dc20181026-rb20181026/monodelphis_domestica
- 946 ancestral and ubiquitous sequence(s) for monodelphis domestica
- 124 lineage specific sequence(s) for monodelphis domestica