LiftOver chain file from human hg18 to T2T-PanTro

[Abigail Sequeira]

Hello, 

Is it possible to generate a LiftOver chain file from the human hg18 reference to the T2T-PanTro reference? 

Thanks,

Abigail S.

[Luis Nassar]

Hi, Abigail.

Thank you for your patience while we ran up this alignment.

The requested liftOver file can now be found here:

https://hgdownload.gi.ucsc.edu/goldenPath/hg18/liftOver/hg18ToGCF_028858775.2.over.chain.gz

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Lou Nassar
UCSC Genomics Institute