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[Genome] UCSC Broswer installation
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G, Chittybabu
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Sep 10, 2008, 2:55:13 AM
9/10/08
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to gen...@soe.ucsc.edu
Hi All,
We are planning to have local installation of UCSC Browser. We need few clarification on the points mentioned below:
A) Is genome graphs part of the installation available ?
B) Is there a way to invoke genome graphs as URL invocation (similar to UCSC browser custom tracks URL initiation i.e.,
http://genome.ucsc.edu/cgi-bin/hgTracks?org=human&position=chr22&hgt.customText=http://genome.ucsc.edu/goldenPath/help/test.bed
)
Thanks a lot in advance.
Thanks and regards,
Chittybabu G
Kayla Smith
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Sep 10, 2008, 6:39:24 PM
9/10/08
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to G, Chittybabu, gen...@soe.ucsc.edu
Hello Chittybabu,
A) Yes, Genome Graphs is part of the installation.
You may also be interested in joining the genome-mirror mailinglist:
http://www.soe.ucsc.edu/mailman/listinfo/genome-mirror
And here is a FAQ on mirroring/licensing the Genome Browser:
http://genome.ucsc.edu/FAQ/FAQlicense#license3
B) You can save a session, using the hgSession tool, and construct a
link similar to this one:
http://genome.ucsc.edu/cgi-bin/hgGenome?hgS_doOtherUser=submit&hgS_otherUserName=Kayla&hgS_otherUserSessionName=kayla%2Dtest%2DGG
I hope this information is helpful to you. Please don't hesitate to
contact us again if you require further assistance.
Kayla Smith
UCSC Genome Bioinformatics Group
> _______________________________________________
> Genome maillist -
Gen...@soe.ucsc.edu
>
http://www.soe.ucsc.edu/mailman/listinfo/genome
G, Chittybabu
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Sep 11, 2008, 2:48:14 AM
9/11/08
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to Kayla Smith, gen...@soe.ucsc.edu
Hi Kayla Smith,
Thanks a lot for the response, I shall get back in case of any further assistance required.
Really thankful for the assistance provided.
Thanks and regards,
Chittybabu G
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