LiftOver request

[Leticia Rodríguez Montes]

Dear Genome UCSC team,

I would like to ask if it would be possible to get the following liftOver chain files:

- mm39(GCA_000001635.9) to mOrnAna1.p.v1(GCA_004115215.2)

- mOrnAna1.p.v1(GCA_004115215.2) to mm39(GCA_000001635.9)

- mm39(GCA_000001635.9) to Oar_rambouillet_v1.0 (GCA_002742125.1)

- Oar_rambouillet_v1.0 (GCA_002742125.1) to mm39(GCA_000001635.9)

Thank you very much for your help!

Best regards,

Leticia Rodríguez-Montes

[Gerardo Perez]

Hello, Leticia.

Thank you for your interest in the Genome Browser.

The requested liftOver files can be found on our download server:

mm39 -> GCF_004115215.2: https://hgdownload.soe.ucsc.edu/goldenPath/mm39/liftOver/mm39ToGCF_004115215.2.over.chain.gz

GCF_004115215.2 -> mm39: https://hgdownload.soe.ucsc.edu/hubs/GCF/004/115/215/GCF_004115215.2/liftOver/GCF_004115215.2ToMm39.over.chain.gz

mm39 -> GCF_002742125.1: https://hgdownload.soe.ucsc.edu/goldenPath/mm39/liftOver/mm39ToGCF_002742125.1.over.chain.gz

GCF_002742125.1 -> mm39: https://hgdownload.soe.ucsc.edu/hubs/GCF/002/742/125/GCF_002742125.1/liftOver/GCF_002742125.1ToMm39.over.chain.gz

I hope this is helpful. If you have any further questions, please reply to gen...@soe.ucsc.edu. All messages sent to that address are archived on a publicly-accessible Google Groups forum. If your question includes sensitive data, you may send it instead to genom...@soe.ucsc.edu.

Gerardo Perez
UCSC Genomics Institute

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