GCF_029281585.2 → hg38 chain file

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Hanna Szafranska

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Apr 6, 2026, 3:00:45 PMApr 6
to gen...@soe.ucsc.edu
Hi hello, 

I was wondering if I could request the chain file translating recent NCBI gorilla assembly GCF_029281585.2 to hg38 please?

All the best, 
Hanna Szafranska

——
PhD Candidate | Lancaster Lab 
MRC Laboratory of Molecular Biology (Cell Biology Division)
Francis Crick Avenue | Cambridge | Cambridgeshire | CB2 0QH




Jairo Navarro Gonzalez

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Apr 27, 2026, 5:43:10 PMApr 27
to Hanna Szafranska, gen...@soe.ucsc.edu

Hello,

Thank you for using the UCSC Genome Browser and requesting this liftOver file.

Unfortunately, there have been issues with generating this alignment, and it is taking us a bit longer than expected to complete. Thank you for your patience while we create this liftOver file.

I hope this is helpful. If you have any further questions, please reply to gen...@soe.ucsc.edu.
All messages sent to that address are archived on a publicly accessible Google Groups forum.
If your question includes sensitive data, you may send it to genom...@soe.ucsc.edu instead.

Jairo Navarro
UCSC Genome Browser


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Jairo Navarro Gonzalez

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May 25, 2026, 2:12:16 PMMay 25
to Hanna Szafranska, gen...@soe.ucsc.edu

Hello,

Thank you for using the UCSC Genome Browser and sending your inquiry.

We apologize for the delay in generating these liftOver files; there were issues masking the genomes before they could be used in the alignments. You can download the files from the download server:

hg38 to GCF_029281585.2:

https://hgdownload.soe.ucsc.edu/goldenPath/hg38/liftOver/hg38ToGCF_029281585.2.over.chain.gz

GCF_029281585.2 to hg38:

https://hgdownload.soe.ucsc.edu/hubs/GCF/029/281/585/GCF_029281585.2/liftOver/GCF_029281585.2ToHg38.over.chain.gz

If you have any further questions, please reply to gen...@soe.ucsc.edu.
All messages sent to that address are archived on a publicly accessible Google Groups forum.
If your question includes sensitive data, you may send it to genom...@soe.ucsc.edu instead.

Jairo Navarro
UCSC Genome Browser

Hanna Szafranska

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May 25, 2026, 4:00:27 PMMay 25
to Jairo Navarro Gonzalez, gen...@soe.ucsc.edu
Hi Jairo, 

Thank you so much! 

All the best,

Hanna Szafranska

——
PhD Candidate | Lancaster Lab 
MRC Laboratory of Molecular Biology (Cell Biology Division)
Francis Crick Avenue | Cambridge | Cambridgeshire | CB2 0QH




On 25 May 2026, at 19:11, Jairo Navarro Gonzalez <jnav...@ucsc.edu> wrote:

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