Dear genome browser team,
Warm greetings.
Could you please guide me on where I can find the most recent human genetic map based on genome build hg38? I would like to retrieve genetic positions of SNPs listed below:
SNP Name |
Chromosome |
Genetic position |
Physical position |
Ref. allele |
Alt. allele |
rs3889348 |
7 |
5298844 |
A |
G |
|
rs2289669 |
17 |
19560030 |
G |
A |
|
rs12943590 |
17 |
19716685 |
G |
A |
|
rs34834489 |
17 |
19716951 |
G |
A |
|
rs758427 |
17 |
19717164 |
A |
G |
|
rs272893 |
5 |
132327369 |
T |
C |
|
rs12208357 |
6 |
160122116 |
C |
T |
|
rs2282143 |
6 |
160136611 |
C |
T |
|
rs34130495 |
6 |
160139792 |
G |
A |
|
rs72552763 |
6 |
160139849 |
G |
T |
|
rs622342 |
6 |
160151834 |
C |
A |
|
rs34059508 |
6 |
160154805 |
G |
A |
|
rs316019 |
6 |
16024925 |
A |
C |
|
rs145450955 |
6 |
160250619 |
G |
A |
|
rs201919874 |
6 |
160250625 |
G |
A |
|
rs7757336 |
6 |
160268526 |
T |
G |
|
rs2481030 |
6 |
160335403 |
A |
G |
|
rs520685 |
6 |
160346817 |
G |
A |
|
rs520829 |
6 |
160346873 |
T |
G |
|
rs2292334 |
6 |
160437156 |
G |
A |
|
rs8187722 |
6 |
160443726 |
A |
G |
I have found a genetic map on https://github.com/joepickrell/1000-genomes-genetic-maps but it is based on genome build hg19 and the genetic positions may not be the same for hg38.
Please feel to point towards someone who might be of help.
Kind regards,
Mubita
|
Mwangana Mubita |
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Dear Luis,
Thanks for your response.
I will have a look the links you have highlighted.
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