Liftover chain file for hg19 to hg38

[Nathani, Kaizen]

Hello,

I am reaching out to request the liftover chain file for converting hg19 aseembly coordinates to hg38. I could not find the hg19 assembly files on the online UCSC database, thus reaching out to request one. Would greatly appreciate if I could get the hg19tohg38 liftover chain file.


Best,

Kaizen Nathani, MS
Bioinformatics Analyst III
Clinical Testing Labs (CLIA) - Molecular Oncology

Translational Science and Therapeutics Division
Fred Hutchinson Cancer Center
M 667.351.7636

knat...@fredhutch.org

[Luis Nassar]

Hello.

The hg19 to hg38 liftOver file can be found on our download server here:

    https://hgdownload.gi.ucsc.edu/goldenPath/hg19/liftOver/hg19ToHg38.over.chain.gz

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Lou Nassar
UCSC Genomics Institute