genome version issue

[m15766387510]

Dear Sir or Madam:

       I am trying to use liftOver to convert genome coordinates and annotation files between monDom5(opossum genome assembly MonDom5 - UCSC )and GalGal6(chicken genome assembly Gallus_gallus-6.0 - UCSC),but I realize that the genomes of the 2 species on the UCSC Lift Genome Annotation webpage is monDom5ToGalGal3.over.chain.gz,not the latest genome version(monDom5ToGalGal6.over.chain.gz). I would appreciate it if the page(Lift Genome Annotations (ucsc.edu)) will add the latest genome version of the 2 species as soon, this would help me in my work, many thanks for your work and help.

Sincerely,

Shilei Zhao

[Jairo Navarro Gonzalez]

Hello,

Thank you for using the UCSC Genome Browser and sending your inquiry.

You can now perform this liftOver conversion on the web version of LiftOver:

https://genome.ucsc.edu/cgi-bin/hgLiftOver

If you prefer to perform the conversion locally on your own machine, you can download these liftOver files from the downloads server:

https://hgdownload.soe.ucsc.edu/goldenPath/monDom5/liftOver/monDom5ToGalGal6.over.chain.gz
https://hgdownload.soe.ucsc.edu/goldenPath/galGal6/liftOver/galGal6ToMonDom5.over.chain.gz

I hope this is helpful. If you have any further questions, please reply to gen...@soe.ucsc.edu.
All messages sent to that address are archived on a publicly accessible Google Groups forum.
If your question includes sensitive data, you may send it instead to genom...@soe.ucsc.edu.

Jairo Navarro
UCSC Genome Browser

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