UCSC Blat - formatting question

[Myrand, Scott P.]

Hi there – not sure if this is the best email address to send this request to.

 

Any help for the question below would be insightful

 

Thank you so much for your time and assistance with this request.

 

• Scott

 

Scott P. Myrand

Associate Director – Diagnostic Partnering

Thermo Fisher Scientific

110 Miller Ave Fl. 2

Ann Arbor, MI 48104

Mobile:   248.893.5070

Office:    734.913.1959

scott....@thermofisher.com

 

 

 

This morning a minor but important display setting has changed – wondering if there is a setting to change what is displayed?

 

In the Ensembl gene predictions - Previously, when hovering over a sequence you would see the corresponding exon # or intron # for the sequence – see below with the hand pointer and Intron 9/16

 

 

 

Now the Ensembl transcript ID is displayed. Is it possible to change this setting to go back to the Exon # or Intron # designation, or both?

 

 

 

[Jairo Navarro Gonzalez]

Hello,

Thank you for using the UCSC Genome Browser and reporting your issues.

There was a recent change to the display of transcript mouse-overs in the browser, and this bug
came from that change. I am happy to let you know that this bug has now been fixed, and on a
mouse-over, you should now see the following information:

• Transcript ID
• Strand orientation
• Intron/exon number

Thank you again for bringing this to our attention.

If you have any further questions, please reply to gen...@soe.ucsc.edu.
All messages sent to that address are archived on a publicly-accessible Google Groups forum.
If your question includes sensitive data, you may send it instead to genom...@soe.ucsc.edu.

Jairo Navarro
UCSC Genome Browser

Want to share the Browser with colleagues?
Host a workshop: https://bit.ly/ucscTraining

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[Myrand, Scott P.]

Thank you yes I noticed it is even better with the transcript and exon / intron number

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From: Jairo Navarro Gonzalez <jnav...@ucsc.edu>
Sent: Monday, December 7, 2020 7:25:14 PM
To: Myrand, Scott P. <Scott....@thermofisher.com>
Cc: gen...@soe.ucsc.edu <gen...@soe.ucsc.edu>; Williams, Paul <paul.d....@thermofisher.com>
Subject: Re: [genome] UCSC Blat - formatting question

 

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