space required for UCSC genome browser docker image

[Hoover, David (NIH/CIT) [E]]

Hi all,

Roughly how much disk space is required in /var/lib/docker to hold and run the UCSC genome browser docker image? I know it is at least 4GB, because that is the limit of /var on my server that bottomed...

David
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David Hoover, Ph.D.
Computational Biologist
High Performance Computing Services,
Center for Information Technology,
National Institutes of Health
12 South Dr., Rm 2N207
Bethesda, MD 20892, USA
TEL: (+1) 301-435-2986
Email: hoov...@hpc.nih.gov

[Maximilian Haeussler]

Hi David,

This depends on how much data you want to download. It could be 8TB if you sync hg19 and hg38, but probably know this. Do you mean the cgi-bin files only? That would be around 3GB. 

I imagine you're going to mount the /gbdb and mysql directories from your existing server ? 

I'm curious: is the background of this related to your Rocky8 problems? Are you moving your mirror now into Docker as a result of this problem?

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