[genome-announce] The Breast Cancer Epigenomics Track Hub
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Jairo Navarro Gonzalez
Nov 21, 2022, 5:41:29 PM11/21/22
to genome-...@soe.ucsc.edu
Hello everyone,
We are happy to announce the release of The Breast Cancer Epigenomics Track Hub, available for hg19. This hub integrates multiple breast cancer-related datasets to visualize transcription factor (TF) cistromes and epigenomics datasets through a standardized pipeline that allows direct comparison among datasets. All datasets present in the hub are gathered from published studies and include epigenomics data from breast cancer cell lines, surgically-removed breast tumors, patient-derived xenografts, and normal breast tissue specimens. Additional tracks add further information about the genomic context, such as annotated promoter regions, chromatin accessibility, TFs footprints, and sequence conservation.
We are happy to announce the release of The Breast Cancer Epigenomics Track Hub, available for hg19. This hub integrates multiple breast cancer-related datasets to visualize transcription factor (TF) cistromes and epigenomics datasets through a standardized pipeline that allows direct comparison among datasets. All datasets present in the hub are gathered from published studies and include epigenomics data from breast cancer cell lines, surgically-removed breast tumors, patient-derived xenografts, and normal breast tissue specimens. Additional tracks add further information about the genomic context, such as annotated promoter regions, chromatin accessibility, TFs footprints, and sequence conservation.
Quickly view this hub using the following URL: https://bit.ly/3Xk9Wq2
Jairo Navarro
UCSC Genome Browser
UC Santa Cruz Genomics Institute
Revealing life’s code.
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