CLS Long-read RNA transcripts track for hg38 and mm10

[Luis Nassar]

New Capture long-seq (CLS) long-read lncRNAs tracks are available for hg38 and mm10. These tracks represent the results of targeted long-read RNA sequencing aimed at identifying lowly expressed lncRNAs. The data is comprised of the capture target regions, the reads, and transcript models organized in the following way:

• Targets: Targeted RNA capture regions
• Models: Transcript models generated from reads and merging
• Sample models: Transcript models by sample in which they were observed
• Per-experiment reads: Read mappings per experiment
• Per-experiment Models: Transcript models generated from the experiments

See the track description page and the GENCODE CLS Project site to learn more. Observant users may also notice that the mRNA and EST track group has now been renamed to RNA and Transcriptome for many species, including human and mouse. This change updates the track group to be more inclusive of new technology and data types.

We want to thank the GENCODE consortium for providing these data.