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UCSC Genome Browser project announcements

1–30 of 722

Welcome to the UCSC Genome Browser Announcements Group

Subscribers to this list will receive emails about new and updated genomes, data, and software. Send an email to any of these addresses to subscribe or unsubscribe.

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For questions about the UCSC Genome Browser beyond our help page:

Public Support Forum (publicly accessible): Email questions to genome@soe.ucsc.edu, or search the Public Archives.

Subscribe: genome+subscribe@soe.ucsc.edu
Unsubscribe: genome+unsubscribe@soe.ucsc.edu

Mirror Support Forum (publicly accessible): Email questions to genome-mirror@soe.ucsc.edu, or search the Mirror Archives.

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Confidential/private support (Not publicly accessible): Email questions to genome-www@soe.ucsc.edu

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12/20/24

NCBI Gene Orthologs track available for Human (hg38), Mouse (mm39), Zebrafish (danRer11), Dog (canFam6), and Cow (bosTau9)

Hello Everyone, We are excited to announce a new NCBI Gene Orthologs track for the Human (hg38),

unread,

NCBI Gene Orthologs track available for Human (hg38), Mouse (mm39), Zebrafish (danRer11), Dog (canFam6), and Cow (bosTau9)

Hello Everyone, We are excited to announce a new NCBI Gene Orthologs track for the Human (hg38),

12/20/24

12/18/24

A Genome Browser look at 2024 and support over the holidays

Hello Everyone, We hope everybody had a good and productive year. As we are coming close to the end

unread,

A Genome Browser look at 2024 and support over the holidays

Hello Everyone, We hope everybody had a good and productive year. As we are coming close to the end

12/18/24

11/8/24

New GENCODE gene tracks: Human V47 (hg19/hg38) - Mouse M36 (mm39)

Hello Everyone, We are happy to announce new GENCODE Gene annotation tracks, which correspond to

unread,

New GENCODE gene tracks: Human V47 (hg19/hg38) - Mouse M36 (mm39)

Hello Everyone, We are happy to announce new GENCODE Gene annotation tracks, which correspond to

11/8/24

11/5/24

GIAB Problematic Regions tracks for human (hg38 and hs1)

Hello Everyone, We are pleased to announce the release of the Genome in a Bottle (GIAB) Problematic

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GIAB Problematic Regions tracks for human (hg38 and hs1)

Hello Everyone, We are pleased to announce the release of the Genome in a Bottle (GIAB) Problematic

11/5/24

10/24/24

New GENCODE "KnownGene" V47 for human (hg38) and VM36 for mouse (mm39)

Hello Everyone, We are pleased to announce the release of the GENCODE V47 (hg38) and the GENCODE VM36

unread,

New GENCODE "KnownGene" V47 for human (hg38) and VM36 for mouse (mm39)

Hello Everyone, We are pleased to announce the release of the GENCODE V47 (hg38) and the GENCODE VM36

10/24/24

10/11/24

CADD v1.7 and ClinGen CSpec tracks for hg19 and hg38

Hello Everyone, We are excited to announce two new tracks available for human assemblies hg38/GRCh38

unread,

CADD v1.7 and ClinGen CSpec tracks for hg19 and hg38

Hello Everyone, We are excited to announce two new tracks available for human assemblies hg38/GRCh38

10/11/24

9/30/24

New gnomAD v4.1 tracks for hg38

Hello Everyone, We are excited to release six new Genome Aggregation Database (gnomAD) v4.1 tracks

unread,

New gnomAD v4.1 tracks for hg38

Hello Everyone, We are excited to release six new Genome Aggregation Database (gnomAD) v4.1 tracks

9/30/24

Jairo Navarro Gonzalez

9/24/24

Nuclear mitochondrial DNA segments (NuMTs) for hg38

Hello everyone, We are happy to announce the release of a new track, NuMTs Sequence, for human

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Nuclear mitochondrial DNA segments (NuMTs) for hg38

Hello everyone, We are happy to announce the release of a new track, NuMTs Sequence, for human

9/24/24

8/29/24

Download track data in view

We are pleased to announce a new feature that allows users to download all visible data in the

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Download track data in view

We are pleased to announce a new feature that allows users to download all visible data in the

8/29/24

8/22/24

New groups feature for track hubs

Hello Everyone, We are excited to announce a new grouping feature for track hubs, which allows the

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New groups feature for track hubs

Hello Everyone, We are excited to announce a new grouping feature for track hubs, which allows the

8/22/24

8/14/24

New pop-up dialogue box for item details

Hello Everyone, We are excited to introduce the new Item Details feature which simplifies the user

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New pop-up dialogue box for item details

Hello Everyone, We are excited to introduce the new Item Details feature which simplifies the user

8/14/24

Jairo Navarro Gonzalez

8/12/24

[genome-announce] Illumina SpliceAI tracks for human (hg38 and hg19)

Hello everyone, We pleased to announce the release of the Illumina SpliceAI tracks for the hg38 and

unread,

[genome-announce] Illumina SpliceAI tracks for human (hg38 and hg19)

Hello everyone, We pleased to announce the release of the Illumina SpliceAI tracks for the hg38 and

8/12/24

Jairo Navarro Gonzalez

8/5/24

[genome-announce] GENCODE "KnownGene" v45lift37 release for human (hg19)

Hello everyone, We are excited to announce the release of the GENCODE "KnownGene" v45lift37

unread,

[genome-announce] GENCODE "KnownGene" v45lift37 release for human (hg19)

Hello everyone, We are excited to announce the release of the GENCODE "KnownGene" v45lift37

8/5/24

7/25/24

EVA SNP release 6 for 37 assemblies

We are pleased to announce the release of the EVA SNP release 6 track for 37 assemblies. These tracks

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EVA SNP release 6 for 37 assemblies

We are pleased to announce the release of the EVA SNP release 6 track for 37 assemblies. These tracks

7/25/24

6/7/24

New GENCODE gene tracks: Human V46 (hg19/hg38) - Mouse M35 (mm39)

We are pleased to announce new GENCODE Gene annotation tracks, which correspond to Ensembl 112, for

unread,

New GENCODE gene tracks: Human V46 (hg19/hg38) - Mouse M35 (mm39)

We are pleased to announce new GENCODE Gene annotation tracks, which correspond to Ensembl 112, for

6/7/24

5/22/24

New GENCODE "KnownGene" V46 for human (hg38) and VM35 for mouse (mm39)

Hello Everyone, We are pleased to announce the release of the GENCODE V46 (hg38) and the GENCODE VM35

unread,

New GENCODE "KnownGene" V46 for human (hg38) and VM35 for mouse (mm39)

Hello Everyone, We are pleased to announce the release of the GENCODE V46 (hg38) and the GENCODE VM35

5/22/24

4/25/24

New AbSplice Prediction Scores track for hg19

Hello Everyone, We are excited to announce the release of the AbSplice scores track that was

unread,

New AbSplice Prediction Scores track for hg19

Hello Everyone, We are excited to announce the release of the AbSplice scores track that was

4/25/24

3/26/24

New gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38)

Hello Everyone, We are pleased to announce the release of the gnomAD v4 constraint metrics for human

unread,

New gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38)

Hello Everyone, We are pleased to announce the release of the gnomAD v4 constraint metrics for human

3/26/24

3/7/24

New Prediction Scores super track and BayesDel track for hg19

Hello Everyone, We are happy to announce the new Human Prediction Scores super track for the GRCh37/

unread,

New Prediction Scores super track and BayesDel track for hg19

Hello Everyone, We are happy to announce the new Human Prediction Scores super track for the GRCh37/

3/7/24

3/5/24

New JASPAR tracks: Human (hg19/hg38) - Mouse (mm10/mm39)

Hello Everyone, We are excited to announce the new JASPAR 2024 tracks for human (GRCh37/hg19 and

unread,

New JASPAR tracks: Human (hg19/hg38) - Mouse (mm10/mm39)

Hello Everyone, We are excited to announce the new JASPAR 2024 tracks for human (GRCh37/hg19 and

3/5/24

Jairo Navarro Gonzalez

3/1/24

[genome-announce] AbSplice Prediction Scores for hg38

Hello everyone, We are happy to announce the release of the AbSplice scores track for the human

unread,

[genome-announce] AbSplice Prediction Scores for hg38

Hello everyone, We are happy to announce the release of the AbSplice scores track for the human

3/1/24

Jairo Navarro Gonzalez

2/21/24

[genome-announce] New DECIPHER Dosage Sensitivity tracks for Human (hg19/hg38)

Hello everyone, We are happy to announce the release of DECIPHER dosage sensitivity tracks for human

unread,

[genome-announce] New DECIPHER Dosage Sensitivity tracks for Human (hg19/hg38)

Hello everyone, We are happy to announce the release of DECIPHER dosage sensitivity tracks for human

2/21/24

2/14/24

New GENCODE gene tracks: Human V45 (hg19/hg38) - Mouse VM34 (mm39)

Hello Everyone, We are happy to announce new GENCODE Gene annotation tracks, which correspond to

unread,

New GENCODE gene tracks: Human V45 (hg19/hg38) - Mouse VM34 (mm39)

Hello Everyone, We are happy to announce new GENCODE Gene annotation tracks, which correspond to

2/14/24

Jairo Navarro Gonzalez

2/12/24

[genome-announce] Variants of Concern SARS-CoV-2 track updated with Omicron variants

Hello everyone, We are happy to announce an update to the Variants of Concern track to include the

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[genome-announce] Variants of Concern SARS-CoV-2 track updated with Omicron variants

Hello everyone, We are happy to announce an update to the Variants of Concern track to include the

2/12/24

Jairo Navarro Gonzalez

2/8/24

[genome-announce] CRISPR Targets for human (T2T CHM13v2.0/hs1) now available

Hello everyone, We are pleased to announce the release of the CRISPR Targets track for human (T2T

unread,

[genome-announce] CRISPR Targets for human (T2T CHM13v2.0/hs1) now available

Hello everyone, We are pleased to announce the release of the CRISPR Targets track for human (T2T

2/8/24

Jairo Navarro Gonzalez

1/23/24

[genome-announce] AVADA variants track available for human (hg38)

Hello everyone, We are happy to announce the release of the AVADA variants track for human (GRCh38/

unread,

[genome-announce] AVADA variants track available for human (hg38)

Hello everyone, We are happy to announce the release of the AVADA variants track for human (GRCh38/

1/23/24

1/22/24

New hg38 HPRC track group and data

We are proud to announce the release of four new tracks and a new track group on hg38 dedicated to

unread,

New hg38 HPRC track group and data

We are proud to announce the release of four new tracks and a new track group on hg38 dedicated to

1/22/24

12/22/23

A Genome Browser look at 2023 and support over the holidays

Hello Everyone, We hope you all had a good and productive year. With 2023 coming to a close, we would

unread,

A Genome Browser look at 2023 and support over the holidays

Hello Everyone, We hope you all had a good and productive year. With 2023 coming to a close, we would

12/22/23

Jairo Navarro Gonzalez

12/7/23

[genome-announce] VISTA Enhancers for human and mouse

Hello everyone, We are excited to announce the release of the VISTA Enhancers tracks for human and

unread,

[genome-announce] VISTA Enhancers for human and mouse

Hello everyone, We are excited to announce the release of the VISTA Enhancers tracks for human and

12/7/23

11/30/23

Support for previous RefSeq transcripts while searching on hg38

Have you ever found a variant in a paper and searched for it on the Genome Browser only to receive an

unread,

Support for previous RefSeq transcripts while searching on hg38

Have you ever found a variant in a paper and searched for it on the Genome Browser only to receive an

11/30/23

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