how to download the genes content of my custom track

[Roxy J]

Hi,

I just created a custom track with my own bed file.  I am looking at the annotation in the genome browser, but can' find a way to save the information on my computer. How do I save a file with the content that I am seeing in the browser?

Thanks,

RJ

[Matthew Speir]

Hi Roxy,

Thank you for your question about downloading the information in your
custom track.

You can use the Table Browser to do this.

First, navigate to the Table Browser:
https://genome.ucsc.edu/cgi-bin/hgTables. From there, select the genome
and assembly for which you loaded your custom track. Next, select your
custom track from the "group" and "track" drop-down menus. There should
be a group titled "Custom Tracks" in the "group" drop-down. Then, enter
a name for your custom track file in the box next to "output file".
Lastly, click "get output" and your browser should automatically start
downloading a file containing the contents of your custom track.

I hope this is helpful. If you have any further questions, please reply
to gen...@soe.ucsc.edu. All messages sent to that address are archived
on a publicly-accessible Google Groups forum. If your question includes
sensitive data, you may send it instead to genom...@soe.ucsc.edu.

Matthew Speir
UCSC Genome Bioinformatics Group

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