Mouse mm8 custom track in mm9 assembly

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Raymond .Enke

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May 4, 2015, 12:30:54 PM5/4/15
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Hello,

Is there an easy way to view array data that was formatted for the mouse mm8 genome assembly in the mm9 assembly?

Thanks,
Ray



R. Enke Ph.D. 
Assistant Professor
James Madison University 
Department of Biology
951 Carrier Drive, MSC 7801
Harrisonburg, VA 22807

Steve Heitner

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May 4, 2015, 2:57:18 PM5/4/15
to Raymond .Enke, gen...@soe.ucsc.edu

Hello, Ray.

We have a liftOver tool that you can use to convert your mm8 coordinates to their mm9 equivalents.  We have a web-based tool at http://genome.ucsc.edu/cgi-bin/hgLiftOver or you can download a command line version from http://hgdownload.cse.ucsc.edu/admin/exe/.

Please contact us again at gen...@soe.ucsc.edu if you have any further questions.  All messages sent to that address are archived on a publicly-accessible Google Groups forum.  If your question includes sensitive data, you may send it instead to genom...@soe.ucsc.edu.

---
Steve Heitner
UCSC Genome Bioinformatics Group

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Raymond .Enke

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May 5, 2015, 11:46:05 AM5/5/15
to st...@soe.ucsc.edu, gen...@soe.ucsc.edu
Thanks, that was easy!

Ray


R. Enke Ph.D. 
Assistant Professor
James Madison University 
Department of Biology
951 Carrier Drive, MSC 7801
Harrisonburg, VA 22807

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