Chain file for hg18 to hg19 assembly conversion

[Dilrini De Silva]

Hi, 

How could I access the chain file for hg18 to hg19 assembly conversion please?

Thank you,

Dilrini

— 

Dilrini De Silva, PhD

Research Associate – Bioinformatician

Brenton Lab, CRUK CI

University of Cambridge

Robinson Way

Cambridge CB2 0RE

[Cath Tyner]

Hello Dilrini,

Thanks for contacting the UCSC Genome Browser support team.

You can find the liftOver "over.chain" file from hg18 to hg19 on our downloads server:

http://hgdownload.soe.ucsc.edu/downloads.html#human
http://hgdownload.soe.ucsc.edu/goldenPath/hg18/liftOver/
hg18ToHg19.over.chain.gz

Please respond to this list if you have further questions, and please always feel free to search our mailing list archives for related posts.

Thank you for contacting the UCSC Genome Browser support team. 

​

Please send new and follow-up questions to one of our mailing lists below:

  * Post to the Public Help Forum: E

mail 

gen...@soe.ucsc.edu

​ or search the Public Archives

​  * Post to the Mirror Help Forum: Email

 genome...@soe.ucsc.edu 

or search the Mirror Archives​

​  * Confidential/private help: Email

 genom...@soe.ucsc.edu

Join us on Social Media! Facebook, Twitter, Wordpress Blog, YouTube

UCSC Genome Browser Announcements List (for new data & software)

Request on-site training & workshops at your institution

​Enjoy,​

Cath
. . .

Cath Tyner

UCSC Genome Browser, Software QA & User Support

UC Santa Cruz Genomics Institute

UCSC Genome Browser

--

---
You received this message because you are subscribed to the Google Groups "UCSC Genome Browser Public Support" group.
To unsubscribe from this group and stop receiving emails from it, send an email to genome+un...@soe.ucsc.edu.
To post to this group, send email to gen...@soe.ucsc.edu.
Visit this group at https://groups.google.com/a/soe.ucsc.edu/group/genome/.
To view this discussion on the web visit https://groups.google.com/a/soe.ucsc.edu/d/msgid/genome/D67D4D5F.4E37%25dilrini.desilva%40cruk.cam.ac.uk.
For more options, visit https://groups.google.com/a/soe.ucsc.edu/d/optout.