refSeqSummary file missing
Gleason, Adam G
Hi,
I am one of the Clinical Analysts at the Division of Genomic Diagnostics and also responsible for clinical pipeline operations involving SNP Arrays. I am trying to download an updated version of the genome annotation file called refSeqSummary.txt for the hg19 Human build and I cannot seem to find it on the Genome Browser annotation data page. The file is used in the illumina GenomeStudio software to display gene information like function or disease linkage. I have attached an excerpt of an older version of the file I have that works with the software and I am looking to update the annotations to their current form. Any information would be greatly appreciated. Thank you.
Best,
Adam Gleason
Tech Specialist II
Division of Genomic Diagnostics - SNP Array Core
3615 Civic Center Blvd
Abramson Research Center, 715G
Philadelphia, PA 19104
phone: 215-590-3885
Jairo Navarro Gonzalez
Dear Adam,
Thank you for using the UCSC Genome Browser and your question about the location of our refSeqSummary file.
The refSeqSummary table has recently moved to a shared database called hgFixed. Please see this page for more information:
https://genome.ucsc.edu/FAQ/FAQdownloads.html#download35
Thank you again for your inquiry and using the UCSC Genome Browser. If you have any further questions, please reply to gen...@soe.ucsc.edu. All messages sent to that address are archived on a publicly-accessible forum. If your question includes sensitive data, you may send it instead to genom...@soe.ucsc.edu.
Jairo Navarro
UCSC Genomics Institute
--
---
You received this message because you are subscribed to the Google Groups "UCSC Genome Browser discussion list" group.
To unsubscribe from this group and stop receiving emails from it, send an email to genome+un...@soe.ucsc.edu.
