bacterial applications
neuro...@aol.com
Is there a way to use your in silico program to examine bacterial genome and bacterial primers?
Sincerely,
Stephen Espitia
Christopher Lee
Hi Stephen,
Thank you for your question about examining bacterial data. Unfortunately we do not host data for any bacterial genomes. You might try this other lab that runs a mirror of our browser for a number of different bacterial species:
Note that if you have questions with their site you will need to contact them directly:
http://archaea.ucsc.edu/contacts.html
Another option is to download our Genome Browser in a Box (GBiB) from our genome-store:
https://genome-store.ucsc.edu/
and host your own assembly hub on your gbib, where you can set up a
blat server to serve blat and isPCR requests. Please see the following
pages for help setting up your GBiB and building an assembly and
starting a blat server:
http://genome.ucsc.edu/goldenPath/help/gbib.html
http://genomewiki.ucsc.edu/index.php/Assembly_Hubs
Thank you again for your inquiry and using the UCSC Genome Browser. If
you have any further questions, please reply to gen...@soe.ucsc.edu.
All messages sent to that address are archived on a
publicly-accessible forum. If your question includes sensitive data,
you may send it instead to genom...@soe.ucsc.edu.
Christopher Lee
UCSC Genomics Institute
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Christopher Lee
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