Two New Assemblies Now Available in the Genome Browser

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Christopher Lee

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Dec 21, 2015, 2:47:48 PM12/21/15
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A Genome Browser is now available for the frog (Xenopus tropicalis) assembly released September 2012 by the US DOE Joint Genome Institute (JGI-PGF) (JGI v7.0, UCSC version xenTro7). For more information and statistics about this assembly, see the NCBI assembly record for Xtropicalis_v7. There are 7,728 scaffolds with a total size of 1,437,530,879 bases.

Bulk downloads of the sequence and annotation data may be obtained from the Genome Browser FTP server or the Downloads page. Please observe the conditions for use when accessing and using these data sets. The annotation tracks for this browser were generated by UCSC and collaborators woldwide. See the Credits page for a detailed list of the organizations and individuals who contributed to this release.

A Genome Browser is now available for the cat (Felis catus) assembly released November 2014 by the International Cat Genome Sequencing Consortium (ICGSC version Felis_catus_8.0, UCSC version felCat8). For more information and statistics about this assembly, see the NCBI assembly record for Felis_catus_8.0. There are 267,625 scaffolds with a total size of 2,641,342,258 bases.

Bulk downloads of the sequence and annotation data may be obtained from the Genome Browser FTP server or the Downloads page. Please observe the conditions for use when accessing and using these data sets. The annotation tracks for this browser were generated by UCSC and collaborators woldwide. See the Credits page for a detailed list of the organizations and individuals who contributed to this release.

Christopher Lee

UCSC Genome Bioinformatics Group

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