Hello Sol,
Thank you for reporting your issues when loading your BAM custom track.
You have discovered a bug for paired-end BAM files, and it has been fixed on our development server. The fix will be released on Feb. 28, 2023.
Thank you again for bringing this to our attention.
If you have any further questions, please reply to gen...@soe.ucsc.edu.
All messages sent to that address are archived on a publicly accessible Google Groups forum.
If your question includes sensitive data, you may send it instead to genom...@soe.ucsc.edu.
Jairo Navarro
UCSC Genome Browser
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Hi, Sol.
The change is now available on genome preview (http://genome-preview.cse.ucsc.edu). I'm sure you are aware but we have to add the usual disclaimer that features on our preview server have not undergone QA and are subject to change at any time.
Thanks again for bringing this up, and let us know if you see anything else.
Lou Nassar
UCSC Genomics Institute
To view this discussion on the web visit https://groups.google.com/a/soe.ucsc.edu/d/msgid/genome/493acc54-90aa-7875-56eb-10d620b691b3%40ucsc.edu.