FINO installation problem

[Steve Rix]

Hi,

I am using Oracle VirtualBox running Ubuntu Bionic

The FINO installation did not pass one of the make check test programs

Making check in src

make[1]: Entering directory '/home/steve/fino/src'

make[1]: Nothing to be done for 'check'.

make[1]: Leaving directory '/home/steve/fino/src'

make[1]: Entering directory '/home/steve/fino'

if [ -e src/fino ]; then cp -u  src/fino .; fi

if [ -e fino ]; then cd examples; ln -sf ../fino; cd;  fi

make  check-TESTS

make[2]: Entering directory '/home/steve/fino'

make[3]: Entering directory '/home/steve/fino'

FAIL: examples/test-tensile.sh

PASS: examples/test-piston.sh

PASS: examples/test-cantilever.sh

PASS: examples/test-wire.sh

I did wonder if there might be something wrong with the test-tensile.sh file so finished the installation and tried a couple of the examples which give the error

error: PETSc's linear solver did not converge with reason 'DIVERGED_PCSETUP_FAILED' (-11)

I have attached config.log and test-suite.log.

Hope you are able to help. Initial enquiry thread is below

Kind regards

Steve Rix

---

From: jeremy theler 
Sent: 08 March 2020 13:59
To: Steve Rix 
Subject: Re: FINO installation problem

 

Send the erorr you get, config.log the output of fino -i and the OS version you use.

--
jeremy theler
www.seamplex.com

On Sun, Mar 8, 2020, 10:45 Steve Rix wrote:

Thanks Jeremy,

I will subscribe to the mailing list

Steve Rix

---

From: jeremy theler 
Sent: 08 March 2020 13:37
To: Steve Rix 
Subject: Re: FINO installation problem

 

Dear Steve

The tests pass ok on my side with the latest version of Fino.

Would you send me the output of

fino -info

and the config.log file?

If you are subscribed to the mailing list I would rather move this thread there so if there is any error I cannot see someone else would also be able to see it. And it we fix it, it is recorded how we manage to did it.

Regards

--

jeremy

On Sun, Mar 8, 2020 at 10:13 AM Steve Rix  wrote:

Hi Jeremy,

I have tried to sort this out myself but not succeeded. Thought it was time to get some help and hope you are able to assist.

It is a problem to do with PETSc. I actually ignored the error message after trying several things to put it right but many of the examples don't work all giving the same error message

PETSc's linear solver did not converge with reason 'DIVERGED_PCSETUP_FAILED' (-11)

Are you able to suggest what to do to correct?

Look forward to hearing from you

Steve Rix

[Jeremy Theler]

Hi Steve.

This is weird. The other tests seem to pass...

1. What is the output of "fino -i"?

2. Execute these commands from the fino directory and send us the output of each command:

cd wasora

git describe

cd ../examples

md5sum tensile-test.msh 

md5sum tensile-test.fin

fino tensile-test.fin

fino tensile-test.fin --mumps

Maybe there is something wrong with the wasora version you are using.

--
You received this message because you are subscribed to the Google Groups "wasora" group.
To unsubscribe from this group and stop receiving emails from it, send an email to wasora+un...@seamplex.com.
To view this discussion on the web visit https://groups.google.com/a/seamplex.com/d/msgid/wasora/edcd901a-2202-4047-871b-1f366b2b87d0%40seamplex.com.

[Steve Rix]

Hi Jeremy,

Info as requested

fino -i

Fino v0.6.94-g76cf295+Δ

a free finite-element thermo-mechanical solver

Last commit date   : Wed Feb 26 09:53:44 2020 -0300

Build date         : 2020-03-08 12:16:57

Build architecture : linux-gnu x86_64

Builder            : steve@steve-VirtualBox

Compiler           : gcc (Ubuntu 7.4.0-1ubuntu1~18.04.1) 7.4.0

Compiler flags     : -O3

PETSc version      : Petsc Release Version 3.7.7, Sep, 25, 2017

PETSc arch         : x86_64-linux-gnu-real

SLEPc version      : SLEPc Release Version 3.7.4, May 17, 2017

wasora v0.6.107-ga125288

wasora’s an advanced suite for optimization & reactor analysis

Last commit date   : Wed Mar 4 07:27:20 2020 -0300

Build date         : 2020-03-08 12:16:57

Build architecture : linux-gnu x86_64

Builder            : steve@steve-VirtualBox

GSL version        : 2.4

SUNDIALs version   : 2.7.0

Other info requested

steve@steve-VirtualBox:~/fino/wasora$ git describe

v0.6-107-ga125288

steve@steve-VirtualBox:~/fino/wasora$ cd ../examples

steve@steve-VirtualBox:~/fino/examples$ md5sum tensile-test.msh

e5b5b03a5f34b53afd691e822c9f8438  tensile-test.msh

steve@steve-VirtualBox:~/fino/examples$ md5sum tensile-test.fin

1400fc169fd9d2e2693a66e04b9c25af  tensile-test.fin

steve@steve-VirtualBox:~/fino/examples$ fino tensile-test.fin

....................................................................................................

error: PETSc's linear solver did not converge with reason 'DIVERGED_PCSETUP_FAILED' (-11)

steve@steve-VirtualBox:~/fino/examples$ fino tensile-test.fin --mumps

....................................................................................................

----------------------------------------------------------------------------------------------------

====================================================================================================

displ_max = 0.001 mm

sigma_max = 118.8 MPa

principal1 at center = 0.00000000 MPa

reaction  = [ -4.931e-163 -6.752e-163 3.362e-164 ] Newtons

[Steve Rix]

Sorry

other info requested

steve@steve-VirtualBox:~/fino/wasora$ git describe

v0.6-107-ga125288

steve@steve-VirtualBox:~/fino/wasora$ cd ../examples

steve@steve-VirtualBox:~/fino/examples$ md5sum tensile-test.msh

e5b5b03a5f34b53afd691e822c9f8438  tensile-test.msh

steve@steve-VirtualBox:~/fino/examples$ md5sum tensile-test.fin

1400fc169fd9d2e2693a66e04b9c25af  tensile-test.fin

steve@steve-VirtualBox:~/fino/examples$ fino tensile-test.fin

....................................................................................................

error: PETSc's linear solver did not converge with reason 'DIVERGED_PCSETUP_FAILED' (-11)

steve@steve-VirtualBox:~/fino/examples$ fino tensile-test.fin --mumps

....................................................................................................

----------------------------------------------------------------------------------------------------

====================================================================================================

displ_max = 0.001 mm

sigma_max = 118.8 MPa

principal1 at center = 0.00000000 MPa

reaction  = [ -4.931e-163 -6.752e-163 3.362e-164 ] Newtons

On Monday, 9 March 2020 18:32:17 UTC, Steve Rix wrote:

[Jeremy Theler]

Dear Steve

I confirm that I get the same results you do when compiling against PETSc 3.7.7

Give some time to debug the code and figure out what is going on.

Sorry for the inconvenience.

Regards

--

jeremy theler

www.seamplex.com

--

You received this message because you are subscribed to the Google Groups "wasora" group.
To unsubscribe from this group and stop receiving emails from it, send an email to wasora+un...@seamplex.com.

To view this discussion on the web visit https://groups.google.com/a/seamplex.com/d/msgid/wasora/f1832161-6edc-4c6d-b4e1-611fbf628ae2%40seamplex.com.

[jeremy theler]

Steve, can you try with the latest git version? I think it is working now.

--
jeremy theler
www.seamplex.com

<div style="border-bottom-color:currentColor;border-bottom-style:none;border-bottom-width:0px;border-left-color:currentColor;border-left-style:none;border-left-width:0px;border-right-color:currentColor;border-right-style:none;border-right-width:0px;border-top-color:currentColor;border-top-style:none;border-top-width:0px;color:inherit;font-family:inherit;font-size:inherit;font-size-adjust:none;font-stretch:inherit;font-style:inherit;font-variant:inherit;font-weight:inherit;line-height:inherit;margin-bottom:0px;margin-left:0px;margin-right:0

[Steve Rix]

Hi Jeremy,

Sorry not to have got back sooner. I will try with the latest git hub version this weekend and get back to you.

On Monday, 9 March 2020 18:32:17 UTC, Steve Rix wrote: