RTG Core 3.8.3 / RTG Tools 3.8.3

[RTG Announcements]

New stable releases are now available which include minor improvements and bug fixes.

The first of these is our full analysis suite, RTG Core 3.8.3 The changes in this version are listed below.  Commercial users may download the update from our website at http://realtimegenomics.com/products/rtg-core-downloads. Non-commercial users can download the update from our website at http://realtimegenomics.com/products/rtg-core-non-commercial or build from the updated source code on github at https://github.com/RealTimeGenomics/rtg-core.

We have also produced updated builds of our utilities package, RTG Tools 3.8.3 which is made freely available for non-commercial or commercial use alike. More information and download links are available from our website at http://realtimegenomics.com/products/rtg-tools or build from the updated source on github at https://github.com/RealTimeGenomics/rtg-tools.

RTG Core 3.8.3 (2017-08-02)

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This release primarily includes bugfixes and minor improvements:

* rocplot: (GUI) Improvements to graph zooming, to allow stepping back

  to previous zoom levels as well as fully un-zooming.

* rocplot: Improve the automatic curve naming heuristic to ignore

  directory name suffixes like "-eval", ".vcfeval" etc, and similar

  prefixes.

* rocplot: Enable text antialiasing in GUI and PNG output.

* vcfeval: More graceful handling of input VCFs containing REF values

  that are not valid according to VCF specifications.

* vcfmerge/vcfeval: Normalize the casing of nucleotides in REF/ALT,

  which permits merging records where the REF/ALT differ in casing.

* vcffilter: Graceful error handling of a new category of invalid

  javascript expression.

* vcfsubset: Don't complain when using --keep-filter/--remove-filter

  flags with "PASS" and the VCF header doesn't contain a declaration for

  that filter.

* misc: Prevent a unit test failure when running on newer versions of

  Ubuntu.