Some modules do not start in OpenMRS 1.9.3

[Daniel Dut A.]

Dear all,
I have been trying to install some modules to my OpenMRS 1.9.3 implementation (standalone) and some of them install but fail to start. what can I do to solve this?
I tried MEDICAL PROBLEM module on which INPATIENT CARE module seems to depend, HR module, HTML Form Entry Designer and many others and none of these started.

The HR module just left a menu item on my system that when clicked says: ' The page "/openmrs/module/hr/manager/findStaff.list" cannot be found. Check the link and try again '  How can I remove this menu Item?

Below is the error I get when installing the HR and Medical Problem modules respectively:

Error while trying to start module
Unable to update data model using liquibase.xml. Module: Human Resource Module
 ** org.openmrs.module.ModuleFactory.runLiquibase(ModuleFactory.java:776)
 ** org.openmrs.module.ModuleFactory.startModuleInternal(ModuleFactory.java:549)
 ** org.openmrs.api.context.Daemon$1.run(Daemon.java:58)
--------------------------------------------------------------------------------------

Unable to refresh the WebApplicationContext
Error creating bean with name 'messageSourceServiceTarget' defined in class path resource [applicationContext-service.xml]: Cannot resolve reference to bean 'mutableResourceBundleMessageSource' while setting bean property 'activeMessageSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'mutableResourceBundleMessageSource' defined in class path resource [applicationContext-service.xml]: Initialization of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.interceptor.TransactionAttributeSourceAdvisor#0' defined in class path resource [applicationContext-service.xml]: Cannot resolve reference to bean 'transactionInterceptor' while setting bean property 'transactionInterceptor'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'transactionInterceptor' defined in class path resource [applicationContext-service.xml]: Cannot resolve reference to bean 'transactionManager' while setting bean property 'transactionManager'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'transactionManager' defined in class path resource [applicationContext-service.xml]: Cannot resolve reference to bean 'sessionFactory' while setting bean property 'sessionFactory'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in class path resource [applicationContext-service.xml]: Invocation of init method failed; nested exception is org.hibernate.InvalidMappingException: Could not parse mapping document from input stream
org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328)
org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:106)
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1325)
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1086)
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:517)
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456)
org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:291)
org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:288)
org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
org.springframework.context.support.AbstractApplicationContext.initMessageSource(AbstractApplicationContext.java:755)
org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:413)
 ** org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:781)
 ** org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:846)
 ** org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:278)
 ** org.openmrs.module.web.controller.ModuleListController.onSubmit(ModuleListController.java:177)
org.springframework.web.servlet.mvc.SimpleFormController.processFormSubmission(SimpleFormController.java:272)
org.springframework.web.servlet.mvc.AbstractFormController.handleRequestInternal(AbstractFormController.java:268)
org.springframework.web.servlet.mvc.AbstractController.handleRequest(AbstractController.java:153)
org.springframework.web.servlet.mvc.SimpleControllerHandlerAdapter.handle(SimpleControllerHandlerAdapter.java:48)
org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:790)
org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:719)
org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:644)
org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:560)
javax.servlet.http.HttpServlet.service(HttpServlet.java:647)
javax.servlet.http.HttpServlet.service(HttpServlet.java:728)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 ** org.openmrs.module.web.filter.ForcePasswordChangeFilter.doFilter(ForcePasswordChangeFilter.java:65)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 ** org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:76)
 ** org.openmrs.module.xforms.web.XformsFilter.doFilter(XformsFilter.java:60)
 ** org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:74)
 ** org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:58)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 ** org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:111)
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
org.springframework.orm.hibernate3.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:198)
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 ** org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:109)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 ** org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:109)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 ** org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:109)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:222)
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:123)
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171)
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99)
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:953)
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408)
org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1023)
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:589)
org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:310)
java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
java.lang.Thread.run(Unknown Source)

Any help will be highly appreciated,

Thanks,
Daniel Dut (Kampala, Uganda)

[Friedman, Roger (CDC/CGH/DGHA) (CTR)]

Dear Daniel Dut,

     Of the modules you mentioned, I can only speak to the HR module.  Are you sure that you got the 1.9 version of that module?  Your error message sounds like the answer is no.  The 1.9 version is kept in git.  As for getting rid of the menu item, that seems to be a problem with modules that are uninstalled, their use of extension points does not uninstall.  You will have to shut down OpenMRS, remove the HR module from the modules directory in your OpenMRS application directory, and restart.

Saludos, Roger

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