Build Opendtect 6.4.0 from source on Linux.

Rafael Stanislau

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Oct 21, 2019, 9:55:43 AM10/21/19

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Hello,

I am trying to build Opendtect 6.4.0 from the source but it is not possible to find the osgQT library. I guest it is because I use the wrong version of OSG and QT. Which version of OSG and QT should be choosen?

Best regards,

Rafael Stanislau.

Wayne Mogg

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Oct 21, 2019, 6:13:50 PM10/21/19

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Hi Rafael,

For OpendTect 6.4 you will need OSG 3.6.3, osgQT 3.5.7 and Qt 5.9.6. The master branch README.md has instructions for building recent versions of the software from source. Let us know if you need more information.

Regards,

Wayne Mogg

Rafael Stanislau

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Oct 29, 2019, 2:55:19 PM10/29/19

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Hi Wayne,

I am struggling to build Qt5.9.6. The error is below:

Makefile:48: recipe for target 'sub-src-make_first' failed
make[1]: *** [sub-src-make_first] Error 2

Makefile: 82: recipe for target 'module-qtbase-make_first' failed
make: *** [module-qtbase-make_first] Error 2

Regards,

Rafael Stanislau.

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wayne.mogg

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Oct 29, 2019, 7:10:39 PM10/29/19

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Rafael,

There is no need to build Qt from source just use the appropriate binary installer (in your case http://download.qt.io/archive/qt/5.9/5.9.6/qt-opensource-linux-x64-5.9.6.run). If you must build Qt from source the Qt specific forums might be a better option for help as I have no experience in building Qt.

Cheers,

Wayne

On Wednesday, October 30, 2019 at 4:55:19 AM UTC+10, Rafael Stanislau wrote:

Hi Wayne,
I am struggling to build Qt5.9.6. The error is below:

Makefile:48: recipe for target 'sub-src-make_first' failed
make[1]: *** [sub-src-make_first] Error 2

Makefile: 82: recipe for target 'module-qtbase-make_first' failed
make: *** [module-qtbase-make_first] Error 2

Regards,

Rafael Stanislau.

Em seg, 21 de out de 2019 às 19:13, Wayne Mogg <wayn...@dgbes.com> escreveu:

Hi Rafael,
For OpendTect 6.4 you will need OSG 3.6.3, osgQT 3.5.7 and Qt 5.9.6. The master branch README.md has instructions for building recent versions of the software from source. Let us know if you need more information.
Regards,
Wayne Mogg

On Monday, October 21, 2019 at 11:55:43 PM UTC+10, Rafael Stanislau wrote:
Hello,
I am trying to build Opendtect 6.4.0 from the source but it is not possible to find the osgQT library. I guest it is because I use the wrong version of OSG and QT. Which version of OSG and QT should be choosen?

Best regards,

Rafael Stanislau.

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Rafael Stanislau

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Oct 30, 2019, 12:04:38 PM10/30/19

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Hi Wayne,

I solved the problem, but when I tried to build the plugins I got the error:

Unknown CMake command "OD_INIT_MODULE"

Can you tell me how to solve it?

Regards,

Rafael Stanislau.

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Wayne Mogg

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Oct 31, 2019, 7:26:27 AM10/31/19

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Rafael,

Sounds like cmake is not finding the OD specific cmake files. Are you running cmake at the commandline or using the gui?

Typically for the commandline route you would do (for an out of source build):

cd "folder where you want to build OpendTect"
cmake -DCMAKE_INSTALL_PREFIX:PATH="where to install the result" -DOpenGL_GL_PREFERENCE=LEGACY -DQTDIR="where the Qt5.9.6 build was installed" -DOSG_DIR:PATH="where the OSG 3.6.3 build was installed" -DOSGQT_DIR="where the osgQt 3.5.7 was installed" -DZLIB_INCLUDE_DIR=/usr/include -DZLIB_LIBRARY=/usr/lib64/libz.so "the OpendTect source folder" (replacing the quoted bits with the paths for your setup)
make (assuming no errors in step 2)
make install (assuming no errors in step 3)

For an in source build the steps would be (don't forget the "." at the end of line 2):

cd "OpendTect source folder"
cmake -DCMAKE_INSTALL_PREFIX:PATH="where to install the result" -DOpenGL_GL_PREFERENCE=LEGACY -DQTDIR="where the Qt5.9.6 build was installed" -DOSG_DIR:PATH="where the OSG 3.6.3 build was installed" -DOSGQT_DIR="where the osgQt 3.5.7 was installed" -DZLIB_INCLUDE_DIR=/usr/include -DZLIB_LIBRARY=/usr/lib64/libz.so . (replacing the quoted bits with the paths for your setup)
make (assuming no errors in step 2)
make install (assuming no errors in step 3)

If you are using the cmake gui:

Set the source and build folders
Press the Configure button
Fill in the various cmake variables (listed in the command lines above) per your setup
Press Configure again ( if you have errors check that step 3 was done completely)
Press Generate
Open a terminal window, cd to the build folder specified in step 1, type make and if it all builds make install

Regards,

Wayne Mogg

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Rafael Stanislau

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Oct 31, 2019, 10:54:33 PM10/31/19

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Hi Wayne,

I am using command line. That was exactly what I was trying to figure out. Another question I would like to ask is if you can tell me how I link OD to matlab.

Regards,

Rafael Stanislau.

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Nanne Hemstra

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Oct 31, 2019, 11:09:27 PM10/31/19

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Hi Rafael,

For the link to MATLAB, please refer to http://doc.opendtect.org/6.4.0/doc/od_userdoc/Default.htm#appendix_f-matlab_link_plugin_for_opendtect.htm for more information.

Let us know if you have any questions.

Best regards,

Nanne

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Rafael Stanislau

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Nov 21, 2019, 1:21:33 AM11/21/19

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Hello,

I am trying to link opendect to matlab by following the steps of http://doc.opendtect.org/6.4.0/doc/od_userdoc/Default.htm#appendix_f-matlab_link_plugin_for_opendtect.htm but I am can't access the matlab code compiled in Opendtect as presented. at session 16.3.5. The MATLAB option, highlighted in the attached image, is not available.

Another issue is that I can't load the plugin "libuiMATLABLink.so". Can you tell me what's wrong?

Best regards,

Rafael Stanislau.

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matlab_option.png

Nanne Hemstra

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Nov 21, 2019, 9:58:41 PM11/21/19

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Rafael,

The library libuiMATLABLink.so has a dependency to the MATLAB libraries. Perhaps OpendTect can not find those.

In a terminal, execute the following:

setenv MATLAB_DIR <MATLAB-install-dir> (e.g. /auto/users/appman/matlab/R2013a)

source <opendtect-install-dir>/6.4.0/bin/init_dtect

ldd <opendtect-install-dir>/6.4.0/bin/lux64/Release/libMATLABLink.so

The output shows the libraries required by libMATLABLink.so and hopefully shows the reason why it doesn't load in your system. If in doubt, please send the output to us.

Best regards,

Nanne

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Rafael Stanislau

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Nov 28, 2019, 6:05:56 PM11/28/19

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Nanne,

Below are the outputs of commands "source <opendtect-install-dir>/6.4.0/bin/init_dtect" and "ldd <opendtect-install-dir>/6.4.0/bin/lux64/Release/libMATLABLink.so", respectively. Could you help me to solve this problem? I'm trying to load it in linux environment.

source /home/marcelopereira/OpendTect/6.4.0/bin/init_dtect

bash: /home/marcelopereira/OpendTect/6.4.0/bin/init_dtect: line 59: syntax error near unexpected token `else'
bash: /home/marcelopereira/OpendTect/6.4.0/bin/init_dtect: line 59: `else'




ldd /home/marcelopereira/OpendTect/6.4.0/bin/lux64/Release/libMATLABLink.so

linux-vdso.so.1 (0x00007ffc399b2000)
	libVolumeProcessing.so => not found
	libmx.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmx.so (0x00007f0675c6a000)
	libmwmclmcr.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmclmcr.so (0x00007f067560a000)
	libVelocity.so => not found
	libAttributeEngine.so => not found
	libNLA.so => not found
	libSeis.so => not found
	libMMProc.so => not found
	libNetwork.so => not found
	libQt5Network.so.5 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libQt5Network.so.5 (0x00007f06752bc000)
	libEarthModel.so => not found
	libGeometry.so => not found
	libWell.so => not found
	libGeneral.so => not found
	libAlgo.so => not found
	libBasic.so => not found
	libQt5Core.so.5 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libQt5Core.so.5 (0x00007f0674b9d000)
	libstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007f0674814000)
	libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f0674476000)
	libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007f067425e000)
	libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f0673e6d000)
	libmwi18n.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwi18n.so (0x00007f0673b1a000)
	libut.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libut.so (0x00007f0673842000)
	libmwfl.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwfl.so (0x00007f0673476000)
	libmwfoundation_usm.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwfoundation_usm.so (0x00007f067324e000)
	libmwboost_log.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_log.so.1.56.0 (0x00007f0672f75000)
	libmwboost_system.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_system.so.1.56.0 (0x00007f0672d72000)
	libmwboost_thread.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_thread.so.1.56.0 (0x00007f0672b4c000)
	libmwcpp11compat.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcpp11compat.so (0x00007f067292c000)
	libicuuc.so.59 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libicuuc.so.59 (0x00007f0672579000)
	libtbb.so.2 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libtbb.so.2 (0x00007f0672321000)
	libtbbmalloc.so.2 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libtbbmalloc.so.2 (0x00007f06720cd000)
	libz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007f0671eb0000)
	libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f0671c91000)
	/lib64/ld-linux-x86-64.so.2 (0x00007f067626c000)
	libmwmcr.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmcr.so (0x00007f067191d000)
	libmwms.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwms.so (0x00007f067140a000)
	libmwservices.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwservices.so (0x00007f0670e23000)
	libmwgraphics_state.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwgraphics_state.so (0x00007f0670bfa000)
	libmex.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmex.so (0x00007f0670962000)
	libmwctfdatainterfaces.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwctfdatainterfaces.so (0x00007f0670747000)
	libmwctfpackage.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwctfpackage.so (0x00007f06704ab000)
	libmwctfrt.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwctfrt.so (0x00007f067029a000)
	libmwctfrtcrypto.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwctfrtcrypto.so (0x00007f066fef8000)
	libmwm_interpreter.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwm_interpreter.so (0x00007f066fb9f000)
	libmwm_dispatcher.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwm_dispatcher.so (0x00007f066f868000)
	libmwmpath.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmpath.so (0x00007f066f5dc000)
	libmwdservices.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwdservices.so (0x00007f066f387000)
	libmwmclbase.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmclbase.so (0x00007f066f11f000)
	libmwmlutil.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmlutil.so (0x00007f066e708000)
	libmwmvm.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmvm.so (0x00007f066e0dd000)
	libmwmcli18nutil.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmcli18nutil.so (0x00007f066ded8000)
	libmwflstoragevfs.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwflstoragevfs.so (0x00007f066dbd1000)
	libmwboost_filesystem.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_filesystem.so.1.56.0 (0x00007f066d9ba000)
	libmwboost_regex.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_regex.so.1.56.0 (0x00007f066d6b3000)
	libmwboost_serialization.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_serialization.so.1.56.0 (0x00007f066d452000)
	librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007f066d24a000)
	libssl.so.1.0.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libssl.so.1.0.0 (0x00007f066cfd8000)
	libcrypto.so.1.0.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libcrypto.so.1.0.0 (0x00007f066cb83000)
	libicui18n.so.59 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libicui18n.so.59 (0x00007f066c703000)
	libicudata.so.59 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libicudata.so.59 (0x00007f066abef000)
	libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007f066a9eb000)
	libmwresource_core.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwresource_core.so (0x00007f066a7e9000)
	libexpat.so.1 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libexpat.so.1 (0x00007f066a5be000)
	libicuio.so.59 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libicuio.so.59 (0x00007f066a3b1000)
	libcrypt.so.1 => /lib/x86_64-linux-gnu/libcrypt.so.1 (0x00007f066a179000)
	libpam.so.0 => /lib/x86_64-linux-gnu/libpam.so.0 (0x00007f0669f6b000)
	libmwboost_date_time.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_date_time.so.1.56.0 (0x00007f0669d5b000)
	libunwind.so.8 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libunwind.so.8 (0x00007f0669b3d000)
	libmwboost_chrono.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_chrono.so.1.56.0 (0x00007f0669937000)
	libmwiqm.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwiqm.so (0x00007f06695f9000)
	libmwbridge.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwbridge.so (0x00007f06693a4000)
	libmwlanguage_execution_interfaces.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlanguage_execution_interfaces.so (0x00007f066919e000)
	libmwcwf_interface.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcwf_interface.so (0x00007f0668f32000)
	libmwsearch_path_impl.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwsearch_path_impl.so (0x00007f0668c7d000)
	libmwsearch_path_interfaces.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwsearch_path_interfaces.so (0x00007f0668a76000)
	libmwsearch_path_utilities.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwsearch_path_utilities.so (0x00007f0668853000)
	libmwmatlabstoragesystem.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmatlabstoragesystem.so (0x00007f066864e000)
	libmwsettingscore.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwsettingscore.so (0x00007f06681d3000)
	libmwmcos.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmcos.so (0x00007f0667f74000)
	libmwm_lxe.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwm_lxe.so (0x00007f0665822000)
	libmwcppmicroservices.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcppmicroservices.so (0x00007f06655fb000)
	libmwddux.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwddux.so (0x00007f06653db000)
	libmwstartup_plugin_initializer.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwstartup_plugin_initializer.so (0x00007f066516d000)
	libmwstartupplugin.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwstartupplugin.so (0x00007f0664f60000)
	libmwboost_iostreams.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_iostreams.so.1.56.0 (0x00007f0664d4c000)
	libCppMicroServices.so.3.1.1 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libCppMicroServices.so.3.1.1 (0x00007f0664a55000)
	libmwlivecode.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlivecode.so (0x00007f0664811000)
	libmwregexp.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwregexp.so (0x00007f06645cc000)
	libmwkeybrd.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwkeybrd.so (0x00007f06643c9000)
	libmwdisplay_device.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwdisplay_device.so (0x00007f06641c2000)
	libmwnativedisplay.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwnativedisplay.so (0x00007f0663fb6000)
	libmwfoundation_matlabdata_matlab.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwfoundation_matlabdata_matlab.so (0x00007f0663ca4000)
	libmwfoundation_extdata_array.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwfoundation_extdata_array.so (0x00007f06639bb000)
	libmwgenerate_diag_message.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwgenerate_diag_message.so (0x00007f06637b3000)
	libmwopccore.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwopccore.so (0x00007f066355d000)
	libmwopcmwservices.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwopcmwservices.so (0x00007f06632fd000)
	libmwopcmodel.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwopcmodel.so (0x00007f066302e000)
	libmwopczippackage.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwopczippackage.so (0x00007f0662e09000)
	libmwxsd_binder.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwxsd_binder.so (0x00007f0662aa3000)
	libxerces-c-3.1.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libxerces-c-3.1.so (0x00007f0662417000)
	libmwexecution_events.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwexecution_events.so (0x00007f0661f25000)
	libmwmathrng.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmathrng.so (0x00007f0661c80000)
	libmwm_parser.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwm_parser.so (0x00007f06611f7000)
	libmwstring_matrix.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwstring_matrix.so (0x00007f0660fcc000)
	libmwcwf_implementation.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcwf_implementation.so (0x00007f0660dc2000)
	libmwsearch_path_events.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwsearch_path_events.so (0x00007f0660bb3000)
	libmwstorageshlibstoragesys.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwstorageshlibstoragesys.so (0x00007f0660972000)
	libmwmst.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmst.so (0x00007f066060b000)
	libmwflnetwork.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwflnetwork.so (0x00007f0660364000)
	libmwflstorageprovider.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwflstorageprovider.so (0x00007f066011c000)
	libmwflstorageevents.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwflstorageevents.so (0x00007f065ff00000)
	libaudit.so.1 => /lib/x86_64-linux-gnu/libaudit.so.1 (0x00007f065fcd7000)
	libmwerrorrecovery.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwerrorrecovery.so (0x00007f065fa40000)
	libmwudd.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwudd.so (0x00007f065f70d000)
	libmwtabcompletion.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwtabcompletion.so (0x00007f065f37b000)
	libmwstoragefilefolderobserver.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwstoragefilefolderobserver.so (0x00007f065f0fb000)
	libmwxmlcore.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwxmlcore.so (0x00007f065ee86000)
	libmwir.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwir.so (0x00007f065ec24000)
	libmwlxeinterfaces.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlxeinterfaces.so (0x00007f065ea14000)
	libmwlxeindexing.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlxeindexing.so (0x00007f065e64d000)
	libmwlxeutilities.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlxeutilities.so (0x00007f065e3df000)
	libmwlxetypes.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlxetypes.so (0x00007f065e18a000)
	libmwm_ir.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwm_ir.so (0x00007f065df0e000)
	libmwprofiler.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwprofiler.so (0x00007f065dcd3000)
	libmwmathcore.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmathcore.so (0x00007f065d6e8000)
	libmwmathelem.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmathelem.so (0x00007f065cd5f000)
	libmwmathlinalg.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmathlinalg.so (0x00007f065c8a9000)
	libmwmathspec.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmathspec.so (0x00007f065c53b000)
	libmwml_front_end_astapi.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwml_front_end_astapi.so (0x00007f065c2c7000)
	libmwml_front_end_driver.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwml_front_end_driver.so (0x00007f065c0b0000)
	libmwlxeirgen.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlxeirgen.so (0x00007f065bd6c000)
	libmwfoundation_matlabdata_standalone.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwfoundation_matlabdata_standalone.so (0x00007f065bad3000)
	libmwflcrypto.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwflcrypto.so (0x00007f065b8a4000)
	libmwflcryptocryptopp.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwflcryptocryptopp.so (0x00007f065b41c000)
	libmwflcryptoutils.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwflcryptoutils.so (0x00007f065b210000)
	libminizip.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libminizip.so (0x00007f065b002000)
	libmwmfl_rng.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmfl_rng.so (0x00007f065adf7000)
	libmwir_xfmr.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwir_xfmr.so (0x00007f065abe3000)
	libmwmtok.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmtok.so (0x00007f065a9d1000)
	libmwstoragesharedlib.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwstoragesharedlib.so (0x00007f065a7b8000)
	libcap-ng.so.0 => /lib/x86_64-linux-gnu/libcap-ng.so.0 (0x00007f065a5b3000)
	libmwcontextdata.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcontextdata.so (0x00007f065a38d000)
	libmwnamesuggestion.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwnamesuggestion.so (0x00007f065a114000)
	libmwboost_locale.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_locale.so.1.56.0 (0x00007f0659e2f000)
	libmwspmatrix.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwspmatrix.so (0x00007f0659bbf000)
	libmwboost_program_options.so.1.56.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwboost_program_options.so.1.56.0 (0x00007f0659942000)
	libmwcholmod.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcholmod.so (0x00007f0659701000)
	libmwmathutil.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmathutil.so (0x00007f06593e6000)
	libmwblas.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwblas.so (0x00007f06591ca000)
	libmwlapack.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwlapack.so (0x00007f0658dfd000)
	libmwumfpack_api.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwumfpack_api.so (0x00007f0658bfa000)
	libmwamd.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwamd.so (0x00007f06589f2000)
	libmwcsparse.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcsparse.so (0x00007f06587e7000)
	libmwma57.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwma57.so (0x00007f06585b9000)
	libmwmetis.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwmetis.so (0x00007f0658351000)
	libmwspqr.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwspqr.so (0x00007f065812e000)
	libmwumfpack.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwumfpack.so (0x00007f0657eda000)
	libmwml_front_end_name_resolution.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwml_front_end_name_resolution.so (0x00007f0657a17000)
	libmwml_front_end_parallel.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwml_front_end_parallel.so (0x00007f06576bc000)
	libmwml_front_end_parser.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwml_front_end_parser.so (0x00007f0657499000)
	libmwdSFMT.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwdSFMT.so (0x00007f0657296000)
	libmwcolamd.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwcolamd.so (0x00007f0657090000)
	libmwbinder.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwbinder.so (0x00007f0656e7c000)
	libmwompwrapper.so => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/libmwompwrapper.so (0x00007f0656c76000)
	libgfortran.so.3 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/../../sys/os/glnxa64/libgfortran.so.3 (0x00007f0656950000)
	libquadmath.so.0 => /home/marcelopereira/MATLAB/R2018a/bin/glnxa64/../../sys/os/glnxa64/libquadmath.so.0 (0x00007f0656711000)

Best regards,

Rafael.

To view this discussion on the web visit https://groups.google.com/a/opendtect.org/d/msgid/developers/CAL%3DdZBM87cKawffXuNbjJq4ta1_b_m_L7U1jmA21p4BxJetySA%40mail.gmail.com.

Wayne Mogg

unread,

Nov 28, 2019, 6:32:46 PM11/28/19

to OpendTect Developers

Rafael,

The init_dtect script is a CShell script so you will need to be in a CShell (not Bash) session to source it, that's why you are seeing the error messages. Try this sequence of commands:

csh

source /home/marcelopereira/OpendTect/6.4.0/bin/init_dtect

ldd /home/marcelopereira/OpendTect/6.4.0/bin/lux64/Release/libMATLABLink.so

Regards,
Wayne Mogg

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