Depending on the goals of your project, you can model the atrium (I assume you meant atrium as opposed to ambient) as a phantom zone on the second floor surrounding the "suspended" offices.
If you want different atrium zones on the two levels, then you can model connections with large orifices or shaft elements with very low resistance between the levels.
You could also model the atrium as a CFD zone, but this would add significant simulation time and require a higher degree of difficulty to define the inputs.
- Stuart