Metagenome analysis question

[R]

Hello,

I am planning to submit raw Illumina HiSeq reads for 6 metagenomes and 6 metatranscriptomes on IMG ER submission site. My first question is whether it is allowed to submit these 12 samples (fastq raw reads) for IMG ER analysis. If yes, will the analysis pipeline incorporate a microbial (Archean) genome that was submitted by me couple of months ago. It is fine for me to make the Archean genome public.I have three other microbial genomes that are now public on IMG. Will they be incorporated into the IMG analysis pipeline automatically? I would be very thankful to you for any clarifications regarding these questions.

Thank you,

Kiran

[I-Min Chen]

IMG no longer accepts fastq submissions.