Pseudogene identification

[Ben Rubin]

Hello,

I submitted two draft genomes for analysis by IMG in part to identify pseudogenes within the assemblies. However, IMG failed to identify any pseudogenes in either genome. This seems unlikely and I am trying to figure out why it happened. Is there an additional analysis that I need to execute in order to obtain pseudogene classifications? I was under the impression that this was a part of the standard pipeline but that does not seem to be the case.

Any help would be greatly appreciated.

Thanks,

Ben