Bacterial species in a sample in IMG-M

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Bren Belovarac

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Jul 14, 2014, 3:58:55 PM7/14/14
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Hello, I'm am trying to see if there is a way to get all the species (names/numbers) identified in an IMG-M microbiome sample at once. 

If I go to "Phylogenetic Distribution of Genes" I can get a list of all the groups and eventually click my way down to a specific category.
So I can go Actinobacteria -> Actinomycetales -> Streptomycetaceae  -> Streptomyces to get to a list of the names and amounts of all the Streptomyces species found in that sample.

However I want to compare multiple microbiomes across many different species, so I would like to get a list of everything without have to go down to each species level, one by one, for every sample.

Is there such a way to get this data easily?

Thank you every much
Bren

Jinghua Huang

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Jul 15, 2014, 5:33:03 PM7/15/14
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Sorry, we don't have such functionality currently.

-Jenny
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