Apollo 2.6.2 released

[Nathan Dunn]

Apollo 2.6.2 released

https://github.com/GMOD/Apollo/releases/tag/2.6.2

Features

• Add option to suppress calculation of non-canonical splice site 2509.
• Added the ability to sync the gene and transcript name with the click of a button 2519.
• Added organism and species to menus 2537.
• Added UUID lookup and link 2539.
• Added status filter for recent annotations 2543.
• Add feature name loc to loadLink 2544.
• loc loadLink now supports UUID and ID popup provides link 2549.

Bug Fixes

• BLAT search should send annotation creation results to the proper reference sequence 2514.
• Properly handle Shine_Dalgarno sequences when added as part of gene model 2515.
• Now able to resize terminators by dragging 2521.
• Added missing GO annotations 2535.
• findAllOrganism webserver failed when user is not an admin and no session is present 2540.
• Provide minor UI and bug fixes 2548.

Infrastructure Changes

• Upgrade to JBrowse 1.16.10

Full change long for all versions can be found here: https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md

Docker builds are on quay.io and docker hub:

https://quay.io/repository/gmod/apollo?tab=builds
https://hub.docker.com/r/gmod/apollo
Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/latest/

Note: You can find a guide upgrading existing Apollo installations here:
https://genomearchitect.readthedocs.io/en/latest/Migration.html

Report issues if found.
Active mailing list (apo...@lbl.gov) and google group.