Hi all,
The first BAM track comes from Star Aligner.
{
"storeClass": "JBrowse/Store/SeqFeature/BAM",
"urlTemplate": "raw/Flower_BAM.bam",
"style": {"className": "feature"},
"label": "Flower_BAM",
"apollo": {
"source": "upload",
"type": "BAM"
},
"type": "JBrowse/View/Track/Alignments",
"category": "v. RNA-seq aligned reads",
"key": "Flower_BAM"
},
This one comes from Hi-sat2 aligner.
{
"key" : "NbRNASeq_Meristem_Feb2019",
"label" : "NbRNASeq_Meristem_Feb2019",
"storeClass" : "JBrowse/Store/SeqFeature/BAM",
"type" : "JBrowse/View/Track/Alignments",
"urlTemplate" : "NbRNASeq_MstS.sorted.bam",
"category" : "vi. Tracks Dev"
},
How do I get the Star Aligner to look like a Hi-sat2 track?
Thank you in advance,
Best wishes,
Michal