I guess a number of us use a separate
python library and its associated command line tool (arrow)
but I doubt that will give you a significant speed up.
One of the main speed ups I take advantage of is proxying the
findAllOrganisms connection
through a faster implementation. (sorry Nathan I'm rubbish
at groovy or we would've contributed it upstream.)
Generally it isn't the database (postgres is very fast), but the queries that could be optimised further. (But the gene model export is complicated)
Ciao,
Helena
--
To unsubscribe from this group and stop receiving emails from it, send an email to apollo+un...@lbl.gov.
![]() | |
![]() | |