Dear all
We are happy to share the final program of our workshop on Machine
Learning for Microbial Genomics at ECML-PKDD22. It will be held online
on Friday, September 23rd from 10:15am to 1:45pm (CET).
Note that you need to register to the ECML-PKDD conference (online rate)
and that you will be able to follow the whole conference week
(September 19th-23rd) by visioconference.
Workshop program: https://mlmg2022.github.io/program/
Registration and main conference website: https://2022.ecmlpkdd.org/index.php/registration/
9:00 - 10:00 ECMLPKDD Keynote: Yann LeCun
10:15 - 13:45 Workshop Machine Learning for Microbial Genomics
Keynote: Alice McHardy "Computational inference of microbial genotype-phenotype relationships"
Talk #1: Gabriel Carvalho et al. "Predicting
antimicrobial resistance genes from phenotypic resistance profiles: a
proof-of-concept study"
Talk #2: Ulysse Guyet et al. "ARSENAL: Antimicrobial ReSistance prEdictioN by mAchine Learning approach"
Talk #3: Niklas Stotzem et al. "BenchmarkDR: A
modular and expandable benchmarking pipeline for machine learning based
antimicrobial resistance prediction"
Keynote: Nicole Wheeler "Machine learning for
predicting phenotype from genotype: how well do algorithms capture
causal mechanisms?"
Talk #4: Jean Cury et al. "Inferring effective
population sizes of bacterial populations while accounting for unknown
recombination and selection: a deep learning approach"
Talk #5: Sion Bayliss et al. "Hierarchical machine
learning predicts geographical origin of Salmonella within four minutes
of sequencing"
Detailed schedule at https://mlmg2022.github.io/program/
Best
Meriem El Azami
Laurent Jacob
Flora Jay
Pierre Mahé