Brain Segmentation

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Armin Allahverdy

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Jul 2, 2024, 7:36:38 AM (6 days ago) Jul 2
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Hi all
Does HCP structural image preprocessing pipeline contain additional steps to segment brain structures (e.g., cerebellum, caudate, thalamus, etc.) and lobes.

Thanks in advance
Armin

Glasser, Matthew

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Jul 2, 2024, 8:05:20 AM (6 days ago) Jul 2
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We have FreeSurfer’s segmentation into subcortical structures but not lobes.  Perhaps FreeSurfer’s folding-based cortical parcellation could be converted into a lobar parcellation.


Matt.

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Armin Allahverdy

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Jul 2, 2024, 8:08:42 AM (6 days ago) Jul 2
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How can I convert FreeSurfer's folding-based cortical parcellation into lobar parcellation?
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