libfontconfig install failure when creating 'anaconda' environment, long /opt/ string
Mike Gangl
Fetching package metadata: ..
Solving package specifications: .
Package plan for installation in environment /home/gangl/envs/tmpEnv:
The following packages will be downloaded:
package | build
---------------------------|-----------------
abstract-rendering-0.5.1 | np19py27_0 67 KB
anaconda-2.2.0 | np19py27_0 3 KB
argcomplete-0.8.4 | py27_0 28 KB
astropy-1.0.1 | np19py27_0 7.2 MB
bcolz-0.8.1 | np19py27_0 954 KB
beautiful-soup-4.3.2 | py27_0 109 KB
binstar-0.10.1 | py27_3 74 KB
blaze-core-0.7.3 | np19py27_0 305 KB
blz-0.6.2 | np19py27_0 887 KB
bokeh-0.8.1 | np19py27_1 13.5 MB
boto-2.36.0 | py27_0 1.3 MB
cairo-1.12.18 | 1 592 KB
certifi-14.05.14 | py27_0 154 KB
cffi-0.9.2 | py27_0 185 KB
clyent-0.3.4 | py27_0 13 KB
colorama-0.3.3 | py27_0 17 KB
configobj-5.0.6 | py27_0 50 KB
cryptography-0.8 | py27_0 704 KB
curl-7.38.0 | 0 521 KB
cython-0.22 | py27_0 5.0 MB
cytoolz-0.7.2 | py27_0 653 KB
datashape-0.4.4 | np19py27_1 95 KB
decorator-3.4.0 | py27_0 8 KB
docutils-0.12 | py27_0 636 KB
dynd-python-0.6.5 | np19py27_0 2.4 MB
enum34-1.0.4 | py27_0 48 KB
fastcache-1.0.2 | py27_0 40 KB
fontconfig-2.11.1 | 2 402 KB
freetype-2.5.2 | 0 2.5 MB
funcsigs-0.4 | py27_0 19 KB
futures-2.2.0 | py27_0 21 KB
gevent-1.0.1 | py27_0 863 KB
gevent-websocket-0.9.3 | py27_0 25 KB
greenlet-0.4.5 | py27_0 33 KB
h5py-2.4.0 | np19py27_0 2.3 MB
hdf5-1.8.14 | 0 1.8 MB
ipython-3.0.0 | py27_0 3.3 MB
ipython-notebook-3.0.0 | py27_1 5 KB
ipython-qtconsole-3.0.0 | py27_0 4 KB
itsdangerous-0.24 | py27_0 16 KB
jdcal-1.0 | py27_0 9 KB
jedi-0.8.1 | py27_0 171 KB
jinja2-2.7.3 | py27_1 308 KB
jsonschema-2.4.0 | py27_0 51 KB
libdynd-0.6.5 | 0 17.6 MB
libffi-3.0.13 | 0 33 KB
libtiff-4.0.2 | 1 930 KB
llvmlite-0.2.2 | py27_1 7.3 MB
lxml-3.4.2 | py27_0 2.7 MB
markupsafe-0.23 | py27_0 30 KB
matplotlib-1.4.3 | np19py27_1 44.6 MB
mistune-0.5.1 | py27_0 19 KB
multipledispatch-0.4.7 | py27_0 11 KB
networkx-1.9.1 | py27_0 934 KB
nltk-3.0.2 | np19py27_0 1.5 MB
nose-1.3.4 | py27_1 189 KB
numba-0.17.0 | np19py27_0 933 KB
numexpr-2.3.1 | np19py27_0 319 KB
odo-0.3.1 | np19py27_0 138 KB
openpyxl-1.8.5 | py27_0 128 KB
pandas-0.15.2 | np19py27_1 9.9 MB
patsy-0.3.0 | np19py27_0 312 KB
pep8-1.6.2 | py27_0 47 KB
pillow-2.7.0 | py27_1 771 KB
pip-6.0.8 | py27_0 1.5 MB
psutil-2.2.1 | py27_0 98 KB
ptyprocess-0.4 | py27_0 19 KB
py-1.4.26 | py27_0 122 KB
pyasn1-0.1.7 | py27_0 48 KB
pycosat-0.6.1 | py27_0 151 KB
pycurl-7.19.5.1 | py27_0 132 KB
pyflakes-0.8.1 | py27_0 50 KB
pygments-2.0.2 | py27_0 1.0 MB
pyopenssl-0.14 | py27_0 122 KB
pyqt-4.11.3 | py27_0 3.5 MB
pytables-3.1.1 | np19py27_2 3.2 MB
pytest-2.6.4 | py27_0 178 KB
python-2.7.9 | 2 13.4 MB
python-dateutil-2.4.1 | py27_0 218 KB
pytz-2015.2 | py27_0 176 KB
pyyaml-3.11 | py27_0 332 KB
pyzmq-14.5.0 | py27_0 655 KB
qt-4.8.6 | 0 35.2 MB
redis-py-2.10.3 | py27_0 70 KB
requests-2.6.0 | py27_0 594 KB
rope-0.9.4 | py27_1 225 KB
runipy-0.1.3 | py27_0 9 KB
scikit-image-0.11.2 | np19py27_0 23.8 MB
scikit-learn-0.15.2 | np19py27_0 7.5 MB
scipy-0.15.1 | np19py27_0 37.0 MB
setuptools-14.3 | py27_0 435 KB
sockjs-tornado-1.0.1 | py27_0 31 KB
sphinx-1.2.3 | py27_0 1005 KB
spyder-2.3.4 | py27_1 4.0 MB
spyder-app-2.3.4 | py27_0 8 KB
sqlalchemy-0.9.9 | py27_0 1.2 MB
statsmodels-0.6.1 | np19py27_0 5.0 MB
sympy-0.7.6 | py27_0 6.2 MB
terminado-0.5 | py27_0 18 KB
theano-0.6.0 | np19py27_0 2.2 MB
toolz-0.7.1 | py27_0 28 KB
tornado-4.1 | py27_0 482 KB
unicodecsv-0.9.4 | py27_0 18 KB
werkzeug-0.10.1 | py27_0 374 KB
xlrd-0.9.3 | py27_0 160 KB
xlsxwriter-0.6.7 | py27_0 175 KB
zeromq-4.0.4 | 0 2.4 MB
------------------------------------------------------------
Total: 288.4 MB
The following packages will be linked:
package | build
---------------------------|-----------------
_license-1.1 | py27_0 soft-link
abstract-rendering-0.5.1 | np19py27_0 hard-link
anaconda-2.2.0 | np19py27_0 hard-link
argcomplete-0.8.4 | py27_0 hard-link
astropy-1.0.1 | np19py27_0 hard-link
bcolz-0.8.1 | np19py27_0 hard-link
beautiful-soup-4.3.2 | py27_0 hard-link
binstar-0.10.1 | py27_3 hard-link
bitarray-0.8.1 | py27_0 soft-link
blaze-core-0.7.3 | np19py27_0 hard-link
blz-0.6.2 | np19py27_0 hard-link
bokeh-0.8.1 | np19py27_1 hard-link
boto-2.36.0 | py27_0 hard-link
cairo-1.12.18 | 1 hard-link
cdecimal-2.3 | py27_0 soft-link
certifi-14.05.14 | py27_0 hard-link
cffi-0.9.2 | py27_0 hard-link
clyent-0.3.4 | py27_0 hard-link
colorama-0.3.3 | py27_0 hard-link
configobj-5.0.6 | py27_0 hard-link
cryptography-0.8 | py27_0 hard-link
curl-7.38.0 | 0 hard-link
cython-0.22 | py27_0 hard-link
cytoolz-0.7.2 | py27_0 hard-link
datashape-0.4.4 | np19py27_1 hard-link
decorator-3.4.0 | py27_0 hard-link
docutils-0.12 | py27_0 hard-link
dynd-python-0.6.5 | np19py27_0 hard-link
enum34-1.0.4 | py27_0 hard-link
fastcache-1.0.2 | py27_0 hard-link
flask-0.10.1 | py27_1 soft-link
fontconfig-2.11.1 | 2 hard-link
freetype-2.5.2 | 0 hard-link
funcsigs-0.4 | py27_0 hard-link
futures-2.2.0 | py27_0 hard-link
gevent-1.0.1 | py27_0 hard-link
gevent-websocket-0.9.3 | py27_0 hard-link
greenlet-0.4.5 | py27_0 hard-link
grin-1.2.1 | py27_1 soft-link
h5py-2.4.0 | np19py27_0 hard-link
hdf5-1.8.14 | 0 hard-link
ipython-3.0.0 | py27_0 hard-link
ipython-notebook-3.0.0 | py27_1 hard-link
ipython-qtconsole-3.0.0 | py27_0 hard-link
itsdangerous-0.24 | py27_0 hard-link
jdcal-1.0 | py27_0 hard-link
jedi-0.8.1 | py27_0 hard-link
jinja2-2.7.3 | py27_1 hard-link
jpeg-8d | 0 soft-link
jsonschema-2.4.0 | py27_0 hard-link
libdynd-0.6.5 | 0 hard-link
libffi-3.0.13 | 0 hard-link
libpng-1.5.13 | 1 soft-link
libsodium-0.4.5 | 0 soft-link
libtiff-4.0.2 | 1 hard-link
libxml2-2.9.0 | 0 soft-link
libxslt-1.1.28 | 0 soft-link
llvmlite-0.2.2 | py27_1 hard-link
lxml-3.4.2 | py27_0 hard-link
markupsafe-0.23 | py27_0 hard-link
matplotlib-1.4.3 | np19py27_1 hard-link
mistune-0.5.1 | py27_0 hard-link
mock-1.0.1 | py27_0 soft-link
multipledispatch-0.4.7 | py27_0 hard-link
networkx-1.9.1 | py27_0 hard-link
nltk-3.0.2 | np19py27_0 hard-link
nose-1.3.4 | py27_1 hard-link
numba-0.17.0 | np19py27_0 hard-link
numexpr-2.3.1 | np19py27_0 hard-link
numpy-1.9.2 | py27_0 hard-link
odo-0.3.1 | np19py27_0 hard-link
openpyxl-1.8.5 | py27_0 hard-link
openssl-1.0.1k | 1 hard-link
pandas-0.15.2 | np19py27_1 hard-link
patsy-0.3.0 | np19py27_0 hard-link
pep8-1.6.2 | py27_0 hard-link
pillow-2.7.0 | py27_1 hard-link
pip-6.0.8 | py27_0 hard-link
pixman-0.26.2 | 0 soft-link
ply-3.4 | py27_0 soft-link
psutil-2.2.1 | py27_0 hard-link
ptyprocess-0.4 | py27_0 hard-link
py-1.4.26 | py27_0 hard-link
py2cairo-1.10.0 | py27_2 hard-link
pyasn1-0.1.7 | py27_0 hard-link
pycosat-0.6.1 | py27_0 hard-link
pycparser-2.10 | py27_0 soft-link
pycrypto-2.6.1 | py27_0 soft-link
pycurl-7.19.5.1 | py27_0 hard-link
pyflakes-0.8.1 | py27_0 hard-link
pygments-2.0.2 | py27_0 hard-link
pyopenssl-0.14 | py27_0 hard-link
pyparsing-2.0.3 | py27_0 hard-link
pyqt-4.11.3 | py27_0 hard-link
pytables-3.1.1 | np19py27_2 hard-link
pytest-2.6.4 | py27_0 hard-link
python-2.7.9 | 2 hard-link
python-dateutil-2.4.1 | py27_0 hard-link
pytz-2015.2 | py27_0 hard-link
pyyaml-3.11 | py27_0 hard-link
pyzmq-14.5.0 | py27_0 hard-link
qt-4.8.6 | 0 hard-link
readline-6.2 | 2 soft-link
redis-2.6.9 | 0 soft-link
redis-py-2.10.3 | py27_0 hard-link
requests-2.6.0 | py27_0 hard-link
rope-0.9.4 | py27_1 hard-link
runipy-0.1.3 | py27_0 hard-link
scikit-image-0.11.2 | np19py27_0 hard-link
scikit-learn-0.15.2 | np19py27_0 hard-link
scipy-0.15.1 | np19py27_0 hard-link
setuptools-14.3 | py27_0 hard-link
sip-4.16.5 | py27_0 hard-link
six-1.9.0 | py27_0 hard-link
sockjs-tornado-1.0.1 | py27_0 hard-link
sphinx-1.2.3 | py27_0 hard-link
spyder-2.3.4 | py27_1 hard-link
spyder-app-2.3.4 | py27_0 hard-link
sqlalchemy-0.9.9 | py27_0 hard-link
sqlite-3.8.4.1 | 1 hard-link
ssl_match_hostname-3.4.0.2 | py27_0 soft-link
statsmodels-0.6.1 | np19py27_0 hard-link
sympy-0.7.6 | py27_0 hard-link
system-5.8 | 2 hard-link
terminado-0.5 | py27_0 hard-link
theano-0.6.0 | np19py27_0 hard-link
tk-8.5.18 | 0 hard-link
toolz-0.7.1 | py27_0 hard-link
tornado-4.1 | py27_0 hard-link
ujson-1.33 | py27_0 soft-link
unicodecsv-0.9.4 | py27_0 hard-link
util-linux-2.21 | 0 soft-link
werkzeug-0.10.1 | py27_0 hard-link
xlrd-0.9.3 | py27_0 hard-link
xlsxwriter-0.6.7 | py27_0 hard-link
xlwt-0.7.5 | py27_0 soft-link
yaml-0.1.4 | 0 soft-link
zeromq-4.0.4 | 0 hard-link
zlib-1.2.8 | 0 hard-link
Proceed ([y]/n)? y
... (omitting downloads)
Extracting packages ...
[ COMPLETE ] |###################################################################################################################################################################################################################################################################| 100%
Linking packages ...
An unexpected error has occurred, please consider sending the###################### | 23%
following traceback to the conda GitHub issue tracker at:
https://github.com/conda/conda/issues
Include the output of the command 'conda info' in your report.
Traceback (most recent call last):
File "/usr/local/anaconda/bin/conda", line 5, in <module>
sys.exit(main())
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/cli/main.py", line 179, in main
args.func(args, p)
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/cli/main_create.py", line 49, in execute
install.install(args, parser, 'create')
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/cli/install.py", line 275, in install
plan.execute_actions(actions, index, verbose=not args.quiet)
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/plan.py", line 419, in execute_actions
execute_plan(plan, index, verbose)
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/plan.py", line 401, in execute_plan
link(prefix, arg)
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/plan.py", line 357, in link
install.link(pkgs_dir, prefix, dist, lt)
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/install.py", line 438, in link
update_prefix(join(prefix, f), prefix)
File "/usr/local/anaconda/lib/python2.7/site-packages/conda/install.py", line 172, in update_prefix
with open(path, 'rb') as fi:
IOError: [Errno 2] No such file or directory: '/opt/anaconda1anaconda2anaconda3anaconda4anaconda5anaconda6anaconda7anaconda8anaconda9anaconda10anaconda11anaconda12anaconda13an binary lib/libfontconfig.so.1.8.0'
And here's my conda info:
Current conda install:
platform : linux-64
conda version : 3.4.1
python version : 2.7.6.final.0
root environment : /usr/local/anaconda (read only)
default environment : /usr/local/anaconda
envs directories : /home/gangl/envs
/usr/local/anaconda/envs
package cache : /home/gangl/envs/.pkgs
/usr/local/anaconda/pkgs
channel URLs : http://repo.continuum.io/pkgs/free/linux-64/
http://repo.continuum.io/pkgs/pro/linux-64/
config file : None
is foreign system : False
That long /opt/ line is giving me cause for concern, but i'm not sure what to do with it.
Thanks in advance for the help,
Mike