Fwd: Webinar: Functional and Taxonomic Profiling of MAGs

[Jeff Christiansen]

Hi All,

This may be of interest. 

The time is terrible for us in Australia, but it will be recorded and uploaded to KBase's YouTube channel https://www.youtube.com/DOEKBase

Cheers

Jeff

---------- Forwarded message ---------
From: KBase <communi...@kbase.us>
Date: Fri, 2 Jul 2021 at 00:19
Subject: Webinar: Functional and Taxonomic Profiling of MAGs

Characterize the genetic content of your metagenome-assembled genomes

Webinar: Functional and Taxonomic Profiling of Metagenome-assembled Genomes July 7, 1pm ET/10am PT Anni Zhang, Lawrence Berkeley National Lab John-Marc Chandonia, Lawrence Berkeley National Lab Alexey Kazakov, Lawrence Berkeley National Lab   KBase's collection of tools for analyzing microbial ecosystems data is growing with new apps developed through support by the Department of Energy's Science Focus Area (SFA) program. Join this webinar to learn about two apps for taxonomic and functional profiling of metagenome-assembled genomes - Fama and Strainfinder - built by researchers with the Ecosystems and Networks Integrated with Genes and Molecular Assemblies SFA (ENIGMA).   Fama examines the genetic potential of a microbial community and the taxonomy of functional genes by direct mapping of individual sequence reads to a curated reference set of proteins.   StrainFinder assigns strain genotypes and assesses strain frequencies for subpopulations of microbial communities with maximum likelihood estimates based on allele frequencies.   Register for the webinar to learn about using these microbial communities tools and more! REGISTER FOR WEBINAR WHAT IS KBASE? The Department of Energy Systems Biology Knowledgebase is a knowledge creation and discovery environment designed for both biologists and bioinformaticians. FREE TO USE KBase is a open-source data-science research platform funded by the US Department of Energy for public use APPS FOR ANALYSIS Over 200 apps for comparative genomics, communities analysis, metabolic modeling, and transcriptomics DATA DRIVEN DISCOVERY Maximize the impact of your data with tools designed to enable analysis in the context of rich public repositories COLLABORATION Share your work with colleagues or the world and organize data from your project, lab, or institution  CREATE AN ACCOUNT ANY QUESTIONS? REACH OUT TO ENG...@KBASE.US View this email in your browser You are receiving this email because of your relationship with KBase. Please reconfirm your interest in receiving emails from us. If you do not wish to receive any more emails, you can unsubscribe here. This message was sent to je...@biocommons.org.au by communi...@kbase.us 1 Bethel Valley Road, Oak Ridge, Tennessee, 37831 Unsubscribe | Manage Subscription | Forward Email | Report Abuse

--

 Jeff Christiansen, PhD 

 Associate Director - Engagements and Operations

 Australian BioCommons

 Axon Building 47, University of Queensland

 St Lucia .  Brisbane .  QLD .  4072

 M: +61 (0) 468 740 880

 W: biocommons.org.au

  This position is funded by Bioplatforms Australia and hosted at QCIF and RCC at the University of Queensland