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Wu Chen
,
harshal patel
3
Mar 22
optimize fit: residual issue
Dear Wu, Please try Initial beta 500, 1000, 1500 &2000 and see if it helps. Best wishes HJP On
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optimize fit: residual issue
Dear Wu, Please try Initial beta 500, 1000, 1500 &2000 and see if it helps. Best wishes HJP On
Mar 22
Neda Naderi
7/26/22
water FWHM
Dear All, Hi, I get water FWHM a negative number while analyzing multi voxel MRS data( GE pfile) can
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water FWHM
Dear All, Hi, I get water FWHM a negative number while analyzing multi voxel MRS data( GE pfile) can
7/26/22
fbri...@gmail.com
, …
Neda Naderi
24
7/18/22
Relaxation time correction
Thank you very much Paul, ..what about 55550 and the estimated number with my parameters??... On
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Relaxation time correction
Thank you very much Paul, ..what about 55550 and the estimated number with my parameters??... On
7/18/22
Neda Naderi
7/18/22
MRSI filter
Hi, In tarquin, preproccessing part we have two options: zero fill k space factor and k-space filter.
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MRSI filter
Hi, In tarquin, preproccessing part we have two options: zero fill k space factor and k-space filter.
7/18/22
Lotfi Kesraoui
, …
Neda Naderi
21
7/18/22
Load T1 in Tarquin
Dear Martin, Hi I got the same problem as Samira's (unable to register MRSI grid on MR image) in
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Load T1 in Tarquin
Dear Martin, Hi I got the same problem as Samira's (unable to register MRSI grid on MR image) in
7/18/22
Alieh Ahdi
6/29/22
ima. and rda. files in MRS
Dear Tarquin Community ! Greetings. I am Alieh Ahdi, Phd student working on Parkinson's disease
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ima. and rda. files in MRS
Dear Tarquin Community ! Greetings. I am Alieh Ahdi, Phd student working on Parkinson's disease
6/29/22
Pom
,
Mark Mikkelsen
2
5/24/22
1.5T and 3T MRS
Hi Pom, You could use a statistical normalization approach such as Z-scoring or ComBat (https://doi.
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1.5T and 3T MRS
Hi Pom, You could use a statistical normalization approach such as Z-scoring or ComBat (https://doi.
5/24/22
Geoffrey Payne
5/18/22
very poor fit and auto reference?
Hello Everyone. I'm wondering if anyone has thoughts about why the QuickFit in one brain spectrum
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very poor fit and auto reference?
Hello Everyone. I'm wondering if anyone has thoughts about why the QuickFit in one brain spectrum
5/18/22
Paul
, …
Paul Mullins
8
3/31/22
Error reading SPAR files in command line on Linux
Cheers Martin, will get to it on Monday. Hope you are well. Prof Paul Mullins Ysgol Gwyddorau Dynol
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Error reading SPAR files in command line on Linux
Cheers Martin, will get to it on Monday. Hope you are well. Prof Paul Mullins Ysgol Gwyddorau Dynol
3/31/22
harshal patel
,
Martin Wilson
4
1/13/22
Parameter setting for 7T 1H MRS datasets
Hi Harshal, I was assuming that TM < TE, but I was mistaken as this isn't the case for STEAM.
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Parameter setting for 7T 1H MRS datasets
Hi Harshal, I was assuming that TM < TE, but I was mistaken as this isn't the case for STEAM.
1/13/22
Pom
,
Martin Wilson
3
8/10/21
Latest TARQUIN version
Thanks, Martin Pom On Mon, Aug 9, 2021 at 21:51 Martin Wilson <martin.w...@gmail.com>
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Latest TARQUIN version
Thanks, Martin Pom On Mon, Aug 9, 2021 at 21:51 Martin Wilson <martin.w...@gmail.com>
8/10/21
rbf...@gmail.com
,
Martin Wilson
2
8/10/21
Leucine and Isoleucine
Hi Rob, Sorry, I'm not aware of any published values for this. You need chemical shifts and j-
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Leucine and Isoleucine
Hi Rob, Sorry, I'm not aware of any published values for this. You need chemical shifts and j-
8/10/21
researc...@gmail.com
, …
Nick Bolo
24
6/7/21
Q&A
GE File Not Being Read by Tarquin
Hi Alex, Thanks for providing the fix (tarquin.redist.macos.10.14.tar.gz), which I've just
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Q&A
GE File Not Being Read by Tarquin
Hi Alex, Thanks for providing the fix (tarquin.redist.macos.10.14.tar.gz), which I've just
6/7/21
Rachael Franklin
,
Martin Wilson
2
4/28/21
Spectral Noise region
Hi Rachael, The spectrum is split into segments of 200 points and the noise is calculated for each.
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Spectral Noise region
Hi Rachael, The spectrum is split into segments of 200 points and the noise is calculated for each.
4/28/21
raj...@gmail.com
3/26/21
MEGA PRESS- Siemens 3T
Hi Martin, I have recently collected the MEGA-PRESS GABA data from the Siemens 3T SKyra scanner. I
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MEGA PRESS- Siemens 3T
Hi Martin, I have recently collected the MEGA-PRESS GABA data from the Siemens 3T SKyra scanner. I
3/26/21
Khaoula Bouazizi
11/9/20
How to import 1D vector data to Tarquin?
Hello, I would like to analyze spectroscopic data coming from TNMR analyzer (.tnt files). They are
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How to import 1D vector data to Tarquin?
Hello, I would like to analyze spectroscopic data coming from TNMR analyzer (.tnt files). They are
11/9/20
Felix Raschke
11/2/20
Prostate MRSI: Citrate basis set
Dear all, I got 3D MRSI prostate datasets acquired at 3T (Siemens). While the vendor provides some
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Prostate MRSI: Citrate basis set
Dear all, I got 3D MRSI prostate datasets acquired at 3T (Siemens). While the vendor provides some
11/2/20
Sai Manohar
,
Ben Rowland
4
7/8/20
Metabolite Quantification using Siemens csi_30 and 135 without water unsupressed file
Hi Dr. Benjamin Rowland, Thanks a lot for the suggestion. I got better signal from the central voxels
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Metabolite Quantification using Siemens csi_30 and 135 without water unsupressed file
Hi Dr. Benjamin Rowland, Thanks a lot for the suggestion. I got better signal from the central voxels
7/8/20
Sai Manohar
6/15/20
Metabolite Quantification _ Siemens csi_30 and 135 without water unsupressed file
Dear Tarquin Community ! Greetings. I am Sai Manohar , PhD student working on Huntington's
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Metabolite Quantification _ Siemens csi_30 and 135 without water unsupressed file
Dear Tarquin Community ! Greetings. I am Sai Manohar , PhD student working on Huntington's
6/15/20
Bartosz Kossowski
2
5/27/20
Age related changes in unsuppressed water signal
It looks like I need to answer myself :) White matter water concentration of 35880M seems to be taken
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Age related changes in unsuppressed water signal
It looks like I need to answer myself :) White matter water concentration of 35880M seems to be taken
5/27/20
Bartosz Kossowski
, …
Helge Zöllner
14
5/14/20
Support needed for GE MEGA-PRESS spectroscopy
Hi Bartosz, That's a great suggestion. As Osprey's data format is based on the FID-A
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Support needed for GE MEGA-PRESS spectroscopy
Hi Bartosz, That's a great suggestion. As Osprey's data format is based on the FID-A
5/14/20
Aleksandra Szcześniak
5/14/20
Shifting spectrum to have a water on 0 ppm
Dear users, together with my colleague, we are working on estimating the temperature of human brains
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Shifting spectrum to have a water on 0 ppm
Dear users, together with my colleague, we are working on estimating the temperature of human brains
5/14/20
Pom Sailasuta
,
Mark Mikkelsen
3
4/16/20
CRLB
Thanks, Mark. Pom On Wed, Apr 15, 2020 at 4:25 PM Mark Mikkelsen <mark.mi...@gmail.com>
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CRLB
Thanks, Mark. Pom On Wed, Apr 15, 2020 at 4:25 PM Mark Mikkelsen <mark.mi...@gmail.com>
4/16/20
Sunitha thakur
,
jamesg...@gmail.com
3
4/2/20
3D GE CSI data conversion to LCModel .raw files
Yes. I used it and it worked! thank you! On Wednesday, October 24, 2018 at 6:26:19 AM UTC-4, jamesg..
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3D GE CSI data conversion to LCModel .raw files
Yes. I used it and it worked! thank you! On Wednesday, October 24, 2018 at 6:26:19 AM UTC-4, jamesg..
4/2/20
Sophie Betka
, …
Vuong Truong
14
2/20/20
Corrections for water attenuation, water concentration, water and metabolites relaxation effects
Dear Paul, I realized that you did not put the #H_M(number of proton that gives rise to the
unread,
Corrections for water attenuation, water concentration, water and metabolites relaxation effects
Dear Paul, I realized that you did not put the #H_M(number of proton that gives rise to the
2/20/20
Tiffany Bell
, …
Eduardo Gonzalez Toledo
3
2/20/20
GE p file
Hi Tiffany!! How do you download the MRS file from the scanner? The software does not recognize the
unread,
GE p file
Hi Tiffany!! How do you download the MRS file from the scanner? The software does not recognize the
2/20/20
Luca Cariati
10/15/19
metabolites in mouse brain
Hello guys, I'm trying to analyze mice brain metabolites concentration using a 7.0 T Bruker
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metabolites in mouse brain
Hello guys, I'm trying to analyze mice brain metabolites concentration using a 7.0 T Bruker
10/15/19
Luca Cariati
10/15/19
help
Hello guys, I'm trying to analyze mice brain metabolites concentration using a 7.0 T Bruker
unread,
help
Hello guys, I'm trying to analyze mice brain metabolites concentration using a 7.0 T Bruker
10/15/19
Jamie Near, Dr.
, …
Surya Gnyawali
4
10/11/19
MEGA-PRESS analysis in Tarquin:
Hi Helge Zollner, Do mind helping in changing the y-axis on the intensity vs chemical shift? the
unread,
MEGA-PRESS analysis in Tarquin:
Hi Helge Zollner, Do mind helping in changing the y-axis on the intensity vs chemical shift? the
10/11/19
Nick Bolo
10/11/19
Changing echo time (--echo) or parameter file (--para_file) by command line not working for Siemens IMA
Hi Tarquin community, First, thanks to all, Tarquin is a great tool. I am trying to process a series
unread,
Changing echo time (--echo) or parameter file (--para_file) by command line not working for Siemens IMA
Hi Tarquin community, First, thanks to all, Tarquin is a great tool. I am trying to process a series
10/11/19