> I just checked in two programs, and did not put the log message.

> I will give a short description here:

> createChargeFile.pl: this program reads the ms2 file generated by CPM
> (charge prediction program), or directory which contains a list of dta file,
> and creates a .charge file. The .charge file has two columns:
> <spectrum_id>\t<charges>.

> mergeCharges.pl: this program reads the .charges file produced by above
> program and the original mzXML file, creates a new mzXML file from the old
> one using the charge info in .charge file, and recreates the mzXML index.

> These programs are used to process the ETD data.

> Thanks,
> Zhi