Building on OS X 10.7.3

[Oded]

Hi all,
I trying to build version TPP 4.5.1 on OS X 10.7.3 and after "make
all" I end up getting the following:
....
g++ -D__LINUX__ -DDEFAULT_TPP_INSTALL_ROOT=\"/usr/local/tpp/\" -
D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D__INTEL__ -DINLINING -
DTPPLIB -fPIC -I. -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/. -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/gzstream -I/Users/OK/Downloads/
TPP-4.5.1/trans_proteomic_pipeline/src/../extern -I/Users/OK/Downloads/
TPP-4.5.1/trans_proteomic_pipeline/src/../build/darwin/
libarchive-2.2.7/libarchive -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../build/darwin/expat-2.0.1/lib -I/Users/
OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/../extern/
boost_1_45_0/boost -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/boost_1_45_0 -I/Users/OK/
Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/. -I/Users/OK/
Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/../build/darwin/
fann-2.0.0/src/include -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../build/darwin/gsl-1.14 -I /opt/local/
include/ -iprefix /Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/ProteoWizard/pwiz/ -iwithprefix
pwiz/data/msdata -iwithprefix pwiz/data -I/Users/OK/Downloads/
TPP-4.5.1/trans_proteomic_pipeline/src/../extern/ProteoWizard/pwiz -
iwithprefix pwiz -iwithprefix pwiz/utility/misc -iwithprefix pwiz/
utility/math -I/Users/OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/
src/../extern/boost_1_45_0/boost -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/boost_1_45_0 -I/Users/OK/
Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/. -iwithprefix
libraries/boost_aux -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/Parsers/ramp -iwithprefix libraries/
libsvm-3.0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -
DPWIZ_USER_VERSION_INFO_H=\"common/TPPVersion.h\" -c -O2 -o /Users/
OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/../build/darwin/
Serializer_mzXML.pwiz.o /Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/ProteoWizard/pwiz/pwiz/data/
msdata/Serializer_mzXML.cpp
g++ -D__LINUX__ -DDEFAULT_TPP_INSTALL_ROOT=\"/usr/local/tpp/\" -
D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D__INTEL__ -DINLINING -
DTPPLIB -fPIC -I. -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/. -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/gzstream -I/Users/OK/Downloads/
TPP-4.5.1/trans_proteomic_pipeline/src/../extern -I/Users/OK/Downloads/
TPP-4.5.1/trans_proteomic_pipeline/src/../build/darwin/
libarchive-2.2.7/libarchive -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../build/darwin/expat-2.0.1/lib -I/Users/
OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/../extern/
boost_1_45_0/boost -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/boost_1_45_0 -I/Users/OK/
Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/. -I/Users/OK/
Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/../build/darwin/
fann-2.0.0/src/include -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../build/darwin/gsl-1.14 -I /opt/local/
include/ -iprefix /Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/ProteoWizard/pwiz/ -iwithprefix
pwiz/data/msdata -iwithprefix pwiz/data -I/Users/OK/Downloads/
TPP-4.5.1/trans_proteomic_pipeline/src/../extern/ProteoWizard/pwiz -
iwithprefix pwiz -iwithprefix pwiz/utility/misc -iwithprefix pwiz/
utility/math -I/Users/OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/
src/../extern/boost_1_45_0/boost -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/boost_1_45_0 -I/Users/OK/
Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/. -iwithprefix
libraries/boost_aux -I/Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/Parsers/ramp -iwithprefix libraries/
libsvm-3.0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -
DPWIZ_USER_VERSION_INFO_H=\"common/TPPVersion.h\" -c -O2 -o /Users/
OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/../build/darwin/
SHA1.pwiz.o /Users/OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/
src/../extern/ProteoWizard/pwiz/pwiz/utility/misc/SHA1.cpp
In file included from /Users/OK/Downloads/TPP-4.5.1/
trans_proteomic_pipeline/src/../extern/ProteoWizard/pwiz/pwiz/utility/
misc/SHA1.cpp:10:
/Users/OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/src/../extern/
ProteoWizard/pwiz/pwiz/utility/misc/endian.hpp:66:2: error: #error
"Unsupported platform: probably need a platform-specific define
above."
make: *** [/Users/OK/Downloads/TPP-4.5.1/trans_proteomic_pipeline/
src/../build/darwin/SHA1.pwiz.o] Error 1

Can someone advice?
Thanks,
Oded

[Ulrich auf dem Keller]

Hi Oded,

the workaround is to comment out conditions for LITTLE_ENDIAN in /extern/ProteoWizard/pwiz/pwiz/utility/misc/endian.hpp:

change to:

// #if (defined(PWIZ_GCC) && defined(__BYTE_ORDER) && __BYTE_ORDER==__LITTLE_ENDIAN) || \

//     (defined(__DARWIN_BYTE_ORDER) && __DARWIN_BYTE_ORDER==__DARWIN_LITTLE_ENDIAN) || \

//     (defined(__DARWIN_10_6_AND_LATER) && defined(__LITTLE_ENDIAN__)) || \

//     (defined(__MINGW32__)) || \

//     (defined(__i386__)) || \

//     (defined(PWIZ_MSVC))

#define PWIZ_LITTLE_ENDIAN

// #endif

// #if (defined(PWIZ_GCC) && defined(__BYTE_ORDER) && __BYTE_ORDER==__BIG_ENDIAN)

// #define PWIZ_BIG_ENDIAN

// #endif

#if defined(PWIZ_LITTLE_ENDIAN) && defined(PWIZ_BIG_ENDIAN)

#error "This isn't happening."

#endif

#if !defined(PWIZ_LITTLE_ENDIAN) && !defined(PWIZ_BIG_ENDIAN)

#error "Unsupported platform: probably need a platform-specific define above."

#endif

changing DARWIN_10_6 to 10_7 didn't help.

Maybe, someone figured out the correct platform definition for 10.7?

Cheers

Ulrich

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[Oded]

Thanks Ulrich.
As always - you got it!
All the best,
Oded