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Description: A low-volume mailing list used to announce new developments in Seattle Proteome Center proteomics tools.
 

new TPP release: 4.3.1 
  We are proud to have released an update for the Trans-Proteomic Pipeline (TPP) software, 4.3.1 (4.3 revision 1). An installer is available for Windows as well as source code for Linux and Mac OS X from all the usual locations; for detailed information including release notes, please see the corresponding post on spctools-discuss:... more »
By Natalie Tasman  - Sep 9 - 1 new of 1 message    

new TPP release: 4.3.0 
  We are proud to have released a major update for the Trans-Proteomic Pipeline (TPP) software, 4.3.0 (4.3 revision 0). An installer is available for Windows as well as source code for Linux and Mac OS X from all the usual locations; for detailed information including release notes, please see the corresponding post on spctools-discuss:... more »
By Natalie Tasman  - Aug 7 - 1 new of 1 message    

leaving the ISB 
  Hello all, It has been a pleasure and honor to work with everyone in our proteomics software community during my time at the Aebserold Lab Seattle / SPC (ISB) over the last three years. Today is my last day at the ISB. Next month I will be starting a new position at Insilicos. As you all probably know from Brian Pratt's involvement... more »
By Natalie Tasman  - May 8 - 1 new of 1 message    

new TPP release: 4.2.1 
  We have released an update for the Trans-Proteomic Pipeline (TPP) software, 4.2.x series, bringing the current version to 4.2 revision 1 (4.2.1). Releases are available for native windows as well as linux and Mac OS X source from all the usual locations (please see below). For detailed information, please see the corresponding post on spctools-discuss:... more »
By Natalie Tasman  - Apr 8 - 1 new of 1 message    

Installation problem 
  Hi, I downloaded the new TPP and tried to install it, but it crashes always with an error that in C:/Inetpup.... cannot be written. I still have some remains of an older version on my 64bit Windows computer, but I have no idea how to remove it, the wiki page is empty. Any help? Thanks a lot Manfred... more »
By ManRai  - Feb 23 - 2 new of 2 messages    

new TPP release: 4.2.0 
  We are proud to offer a major update to the TPP, release 4.2.0, with many bugfixes, improvements, and new features. Releases are available for native windows as well as linux/osx source code from the usual locations. For more information, please see the corresponding post on spctools-discuss: [link]... more »
By Natalie Tasman  - Feb 19 - 1 new of 1 message    

next SPC software course: Apr. 27-May 1, 2009 
  We are pleased to announce that the next TPP course will take place April 27 through May 1, 2009, at the Institute for Systems Biology (Seattle, WA.) Information about the course, registration, and example lectures from previous courses, can be found here: [link] This is an excellent opportunity to hear lectures on the details of the TPP... more »
By Natalie Tasman  - Jan 26 - 1 new of 1 message    

Error during trapper running 
  I met a problem during the trapper programmer running. i tried to converter the .d files to mzXML by trapper. The error message pops up as "“ The exception unknown software exception (0x40000015) occurred in the application at location (0x0042f6b7.)” What could be the problem? The instrument I used is Agilent LC/MSD TOF system with chip-cube... more »
By hover  - Nov 18 2008 - 1 new of 1 message    

TPP 4.1.1 maintenance release available 
  For more information, please see the full post at [link] -Natalie
By Natalie Tasman  - Nov 14 2008 - 1 new of 1 message    

Reminder: TPP Windows requires ActivePerl 
  As previously mentioned, from TPP 4.1 forward, the Windows version of the TPP requires that you install the perl language from ActiveState, called ActivePerl. *ActivePerl version 5.8 is recommended, as it will cleanly overwrite the TPP 4.0.x's custom version of perl which might have been installed, while ActivePerl version 5.10 will not.* ActivePerl can be... more »
By Natalie Tasman  - Nov 11 2008 - 1 new of 1 message    

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